The Complete Mitochondrial Genome of Box Tree Moth Cydalima perspectalis and Insights into Phylogenetics in Pyraloidea
Open Access
Abstract
To resolve and reconstruct phylogenetic relationships within Pyraloidea based on molecular data, the mitochondrial genome (mitogenome) was widely applied to understand phylogenetic relations at different taxonomic levels. In this research, a complete mitogenome of Cydalima perspectalis was recorded, and the phylogenetic position of C. perspectalis was inferred based on the sequence in combination with other available sequence data. According to the research, the circular mitochondrial genome is 15,180 bp in length. It contains 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), 13 typical protein-coding genes (PCGs), and a non-coding control region. The arrangement of a gene of the C. perspectalis mitogenome is not the same as the putative ancestral arthropod mitogenome. All of the PCGs are initiated by ATN codons, except for the cytochrome c oxidase subunit 1 (cox1) gene, which is undertaken by CGA. Five genes have incomplete stop codons that contain only ‘T’. All tRNA genes display a typical clover–leaf structure of mitochondrial tRNA, except for trnS1 (AGN). The control region contained an ‘ATAGG(A)’-like motif followed by a poly-T stretch. Based on the mitochondrial data, phylogenetic analysis within Pyraloidea was carried out using Bayesian inference (BI) and maximum likelihood (ML) analyses. Phylogenetic analysis showed that C. perspectalis is more closely related to Pygospila tyres within Spilomelinae than those of Crambidae and Pyraloidea.Keywords
Funding Information
- National Natural Science Foundation of China (32270487)
This publication has 45 references indexed in Scilit:
- The complete mitochondrial genomes of two ghost moths, Thitarodes renzhiensis and Thitarodes yunnanensis: the ancestral gene arrangement in LepidopteraBMC Genomics, 2012
- MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model SpaceSystematic Biology, 2012
- Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangementsNucleic Acids Research, 2011
- Sex pheromone desaturase functioning in a primitive Ostrinia moth is cryptically conserved in congeners’ genomesProceedings of the National Academy of Sciences, 2011
- Mitochondrial RNA Polymerase Is Needed for Activation of the Origin of Light-Strand DNA ReplicationMolecular Cell, 2010
- Estimating index of population trend by re‐sampling techniques (jackknife and bootstrap) and its application to the life table study of rice leaf roller,Cnaphalocrocis medinalis(Lepidoptera: Pyralidae)Insect Science, 2008
- ButterflyBase: a platform for lepidopteran genomicsNucleic Acids Research, 2007
- Incorporating Molecular Evolution into Phylogenetic Analysis, and a New Compilation of Conserved Polymerase Chain Reaction Primers for Animal Mitochondrial DNAAnnual Review of Ecology, Evolution, and Systematics, 2006
- Inheritance and recombination of mitochondrial genomes in plants, fungi and animalsNew Phytologist, 2005
- Animal Mitochondrial DNA: Structure and Evolution1992