The Behavior and Significance of Degradative Plasmids Belonging to Inc Groups in Pseudomonas within Natural Environments and Microcosms
Open Access
- 1 January 2010
- journal article
- review article
- Published by Japanese Society of Microbial Ecology in Microbes and Environments
- Vol. 25 (4) , 253-265
Abstract
Over the past few decades, degradative plasmids have been isolated from bacteria capable of degrading a variety of both natural and man-made compounds. Degradative plasmids belonging to three incompatibility (Inc) groups in Pseudomonas (IncP-1, P-7, and P-9) have been well studied in terms of their replication, maintenance, and capacity for conjugative transfer. The host ranges of these plasmids are determined by replication or conjugative transfer systems. The host range of IncP-1 is broad, that of IncP-9 is intermediate, and that of IncP-7 is narrow. To understand the behavior of these plasmids and their hosts in various environments, the survivability of inocula, stability or transferability, and efficiency of biodegradation in environments and microcosms have been monitored. The biodegradation and plasmid transfer in various environments have been observed for all three groups, although the kinds of transconjugants differed with the Inc groups. In some cases, the deletion and amplification of catabolic genes acted to reduce the production of toxic catabolic intermediates, or to increase the activity on a particular catabolic pathway. The combination of degradative genes, the plasmid backbone of each Inc group, and the host of the plasmids is key to the degraders adapting to various hosts or to heterogeneous environments.Keywords
This publication has 127 references indexed in Scilit:
- Complete Nucleotide Sequence of TOL Plasmid pDK1 Provides Evidence for Evolutionary History of IncP-7 Catabolic PlasmidsJournal of Bacteriology, 2010
- Novel Assay To Assess Permissiveness of a Soil Microbial Community toward Receipt of Mobile Genetic ElementsApplied and Environmental Microbiology, 2010
- Monitoring the Dissemination of the Broad-Host-Range Plasmid pB10 in Sediment Microcosms by Quantitative PCRApplied and Environmental Microbiology, 2010
- Genome evolution and adaptation in a long-term experiment with Escherichia coliNature, 2009
- Carbazole-Degradative IncP-7 Plasmid pCAR1.2 Is Structurally Unstable in Pseudomonas fluorescens Pf0-1, Which Accumulates Catechol, the Intermediate of the Carbazole Degradation PathwayApplied and Environmental Microbiology, 2009
- Diversity of IncP-9 plasmids of PseudomonasMicrobiology, 2008
- Cultivation-Independent Examination of Horizontal Transfer and Host Range of an IncP-1 Plasmid among Gram-Positive and Gram-Negative Bacteria Indigenous to the Barley RhizosphereApplied and Environmental Microbiology, 2006
- Genomic and Functional Analysis of the IncP-9 Naphthalene-Catabolic Plasmid NAH7 and Its Transposon Tn 4655 Suggests Catabolic Gene Spread by a Tyrosine RecombinaseJournal of Bacteriology, 2006
- Characterization of the Replication, Maintenance, and Transfer Features of the IncP-7 Plasmid pCAR1, Which Carries Genes Involved in Carbazole and Dioxin DegradationApplied and Environmental Microbiology, 2006
- Mechanisms of, and Barriers to, Horizontal Gene Transfer between BacteriaNature Reviews Microbiology, 2005