Boechera or not? Genomic insights and taxonomic reassessment of the misclassified Asian species B. calcarea (Brassicaceae)
Preprint
Abstract
The genus Boechera (Brassicaceae) serves as a model system for studying apomictic reproduction and ecological adaptations, with most species concentrated in North America. Rare occurrences of Boechera species beyond their typical range offers unique opportunities to investigate genome evolution in extralimital environments. One such species, B. calcarea , was described from the Chandalaz Range in northeastern Asia (Russia). This study aimed to investigate the genome structure and evolutionary history of B. calcarea . However, our analyses reveal that the species does not belong to Boechera . Instead, an integrative approach combining cytogenetic, phylogenetic and repeatome analyses identified the species as a member of an ancestral clades within the tribe Arabideae. The diploid Parryodes calcarea (Dudkin) D.A.German & Lysak (2 n = 16) exhibits Arabideae-specific chromosomal signatures, including multiple centromere repositionings. These findings clarify the misattribution of P. calcarea to Boechera , leaving Boechera falcata and Borodinia macrophylla as the only Old World representatives of the Boechereae. This study highlights the importance of integrative methodologies in resolving taxonomic ambiguities and provides new insights into the diversification of the largest cruciferous tribe, Arabideae.Keywords
All Related Versions
- Published version: Plant Diversity, 48 (1), 107.
This publication has 44 references indexed in Scilit:
- Sex inequality driven by dispersalCurrent Biology, 2023
- Global analysis of repetitive DNA from unassembled sequence reads using RepeatExplorer2Nature Protocols, 2020
- Genome Size Evolution Mediated by Gypsy Retrotransposons in BrassicaceaeGenomics, Proteomics & Bioinformatics, 2020
- Generation of Soybean (Glycine max) Transient Transgenic RootsCurrent Protocols in Plant Biology, 2016
- Chromosome Preparation for Cytogenetic Analyses in ArabidopsisCurrent Protocols in Plant Biology, 2016
- Systematics, taxonomy and biogeography of three new Asian genera of Brassicaceae tribe Arabideae: An ancient distribution circle around the Asian high mountainsTaxon, 2012
- Boechera or not? Phylogeny and phylogeography of eastern North American Boechera species (Brassicaceae)Taxon, 2009
- Estimation of nuclear DNA content in plants using flow cytometryNature Protocols, 2007
- Systematics and phylogeny of the Brassicaceae (Cruciferae): an overviewPlant Systematics and Evolution, 2006
- AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS1990