Constructing Compact Takagi-Sugeno Rule Systems: Identification of Complex Interactions in Epidemiological Data
Open Access
- 14 December 2012
- journal article
- research article
- Published by Public Library of Science (PLoS) in PLOS ONE
- Vol. 7 (12) , e51468
Abstract
The Takagi-Sugeno (TS) fuzzy rule system is a widely used data mining technique, and is of particular use in the identification of non-linear interactions between variables. However the number of rules increases dramatically when applied to high dimensional data sets (the curse of dimensionality). Few robust methods are available to identify important rules while removing redundant ones, and this results in limited applicability in fields such as epidemiology or bioinformatics where the interaction of many variables must be considered. Here, we develop a new parsimonious TS rule system. We propose three statistics: R, L, and ω-values, to rank the importance of each TS rule, and a forward selection procedure to construct a final model. We use our method to predict how key components of childhood deprivation combine to influence educational achievement outcome. We show that a parsimonious TS model can be constructed, based on a small subset of rules, that provides an accurate description of the relationship between deprivation indices and educational outcomes. The selected rules shed light on the synergistic relationships between the variables, and reveal that the effect of targeting specific domains of deprivation is crucially dependent on the state of the other domains. Policy decisions need to incorporate these interactions, and deprivation indices should not be considered in isolation. The TS rule system provides a basis for such decision making, and has wide applicability for the identification of non-linear interactions in complex biomedical data.Keywords
This publication has 41 references indexed in Scilit:
- Learning patient-specific predictive models from clinical dataJournal of Biomedical Informatics, 2010
- The SAIL Databank: building a national architecture for e-health research and evaluationBMC Health Services Research, 2009
- The SAIL databank: linking multiple health and social care datasetsBMC Medical Informatics and Decision Making, 2009
- From the Cradle to the Labor Market? The Effect of Birth Weight on Adult OutcomesThe Quarterly Journal of Economics, 2007
- Associations of area based deprivation status and individual educational attainment with incidence, treatment, and prognosis of first coronary event in Rome, ItalyJournal of Epidemiology and Community Health, 2005
- The lasting impact of childhood health and circumstanceJournal of Health Economics, 2005
- Individual- and Area-Level Socioeconomic Status Variables as Predictors of Mortality in a Cohort of 179,383 PersonsAmerican Journal of Epidemiology, 2004
- A review of the construction of hierarchical fuzzy systemsInternational Journal of Intelligent Systems, 2002
- A structure identification method of submodels for hierarchical fuzzy modeling using the multiple objective genetic algorithmInternational Journal of Intelligent Systems, 2002
- Individual social class, area-based deprivation, cardiovascular disease risk factors, and mortality: the Renfrew and Paisley Study.Journal of Epidemiology and Community Health, 1998