Systems‐level approaches for understanding and engineering of the oleaginous cell factory Yarrowia lipolytica
Open Access
- 15 June 2021
- journal article
- review article
- Published by Wiley in Biotechnology and Bioengineering
- Vol. 118 (10) , 3640-3654
Abstract
Concerns about climate change and the search for renewable energy sources together with the goal of attaining sustainable product manufacturing have boosted the use of microbial platforms to produce fuels and high‐value chemicals. In this regard, Yarrowia lipolytica has been known as a promising yeast with potentials in diverse array of biotechnological applications such as being a host for different oleochemicals, organic acid, and recombinant protein production. Having a rapidly increasing number of molecular and genetic tools available, Y. lipolytica has been well studied amongst oleaginous yeasts and metabolic engineering has been used to explore its potentials. More recently, with the advancement in systems biotechnology and the implementation of mathematical modeling and high throughput omics data‐driven approaches, in‐depth understanding of cellular mechanisms of cell factories have been made possible resulting in enhanced rational strain design. In case of Y. lipolytica, these systems‐level studies and the related cutting‐edge technologies have recently been initiated which is expected to result in enabling the biotechnology sector to rationally engineer Y. lipolytica‐based cell factories with favorable production metrics. In this regard, here, we highlight the current status of systems metabolic engineering research and assess the potential of this yeast for future cell factory design development.Keywords
All Related Versions
Funding Information
- Novo Nordisk Fonden (NNF10CC1016517)
This publication has 104 references indexed in Scilit:
- Genome‐scale models of metabolism and gene expression extend and refine growth phenotype predictionMolecular Systems Biology, 2013
- Industrial Systems Biology of Saccharomyces cerevisiae Enables Novel Succinic Acid Cell FactoryPLOS ONE, 2013
- A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolyticaBMC Systems Biology, 2012
- A multi-omic map of the lipid-producing yeast Rhodosporidium toruloidesNature Communications, 2012
- Transcriptomic Analyses during the Transition from Biomass Production to Lipid Accumulation in the Oleaginous Yeast Yarrowia lipolyticaPLOS ONE, 2011
- Production of succinic acid at low pH by a recombinant strain of the aerobic yeast Yarrowia lipolyticaBiotechnology and Bioengineering, 2010
- Ensemble modeling for strain development of l-lysine-producing Escherichia coliMetabolic Engineering, 2009
- Yarrowia lipolytica: A model and a tool to understand the mechanisms implicated in lipid accumulationBiochimie, 2009
- Ensemble Modeling of Metabolic NetworksBiophysical Journal, 2008
- Hydrophobic substrate utilisation by the yeast , and its potential applicationsFEMS Yeast Research, 2005