Definition of CRISPR Cas12a Trans-Cleavage Units to Facilitate CRISPR Diagnostics
Open Access
- 29 November 2021
- journal article
- research article
- Published by Frontiers Media SA in Frontiers in Microbiology
- Vol. 12
Abstract
The CRISPR diagnostic (CRISPR-Dx) technology that employs the trans-cleavage activities has shown great potential in diagnostic sensitivity, specificity, convenience, and portability, and has been recognized as the next-generation diagnostic methods. However, due to the lack of standardized definition of Cas trans-cleavage enzymatic units, it is difficult to standardize the present CRISPR-Dx systems, which have undoubtedly impeded the development of the CRISPR-Dx industry. To solve the problem, we here first systematically optimized the reaction systems for Cas12a, and then defined its trans-cleavage units (transU), which we believe will be of great importance and interest to researchers in both molecular diagnostic industry and basic research. Moreover, a simple protocol was provided to facilitate a step-by-step measurement of the Cas12a transU, which can also act as a reference for the definition of the transU for other Cas proteins.Keywords
Funding Information
- National Natural Science Foundation of China (31922046, 31770057)
- Sanming Project of Medicine in Shenzen Municipality (SZSM202011017)
This publication has 20 references indexed in Scilit:
- Detection of SARS-CoV-2 with SHERLOCK One-Pot TestingNew England Journal of Medicine, 2020
- Ultrasensitive and visual detection of SARS-CoV-2 using all-in-one dual CRISPR-Cas12a assayNature Communications, 2020
- HOLMESv2: A CRISPR-Cas12b-Assisted Platform for Nucleic Acid Detection and DNA Methylation QuantitationACS Synthetic Biology, 2019
- CRISPR/Cas Systems towards Next-Generation BiosensingTrends in Biotechnology, 2019
- Next-generation diagnostics with CRISPRScience, 2018
- CRISPR-Cas12a target binding unleashes indiscriminate single-stranded DNase activityScience, 2018
- Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6Science, 2018
- CRISPR-Cas12a has both cis- and trans-cleavage activities on single-stranded DNACell Research, 2018
- Nucleic acid detection with CRISPR-Cas13a/C2c2Science, 2017
- The CRISPR-associated DNA-cleaving enzyme Cpf1 also processes precursor CRISPR RNANature, 2016