Bioinformatics for NGS-based metagenomics and the application to biogas research

This publication has 186 references indexed in Scilit:

• Gene prediction in metagenomic fragments based on the SVM algorithm
  BMC Bioinformatics, 2013
• Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences
  The ISME Journal, 2012
• An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
  The ISME Journal, 2011
• Individual genome assembly from complex community short-read metagenomic datasets
  The ISME Journal, 2011
• Saliva microbiomes distinguish caries-active from healthy human populations
  The ISME Journal, 2011
• Comparative metagenomics of microbial communities inhabiting deep-sea hydrothermal vent chimneys with contrasting chemistries
  The ISME Journal, 2010
• Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara
  The ISME Journal, 2010
• A renaissance for the pioneering 16S rRNA gene
  Current Opinion in Microbiology, 2008
• An obesity-associated gut microbiome with increased capacity for energy harvest
  Nature, 2006
• Community structure and metabolism through reconstruction of microbial genomes from the environment
  Nature, 2004