Evidence for regulation of columnar habit in apple by a putative 2OG‐Fe(II) oxygenase
- 4 November 2013
- journal article
- Published by Wiley in New Phytologist
- Vol. 200 (4) , 993-999
Abstract
Summary: Understanding the genetic mechanisms controlling columnar‐type growth in the apple mutant ‘Wijcik’ will provide insights on how tree architecture and growth are regulated in fruit trees. In apple, columnar‐type growth is controlled by a single major gene at the Columnar (Co) locus. By comparing the genomic sequence of the Co region of ‘Wijcik’ with its wild‐type ‘McIntosh’, a novel non‐coding DNA element of 1956 bp specific to Pyreae was found to be inserted in an intergenic region of ‘Wijcik’. Expression analysis of selected genes located in the vicinity of the insertion revealed the upregulation of the MdCo31 gene encoding a putative 2OG‐Fe(II) oxygenase in axillary buds of ‘Wijcik’. Constitutive expression of MdCo31 in Arabidopsis thaliana resulted in compact plants with shortened floral internodes, a phenotype reminiscent of the one observed in columnar apple trees. We conclude that MdCo31 is a strong candidate gene for the control of columnar growth in ‘Wijcik’.Keywords
This publication has 34 references indexed in Scilit:
- The genome of the pear (Pyrus bretschneideri Rehd.)Genome Research, 2012
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony MethodsMolecular Biology and Evolution, 2011
- Integrative genomics viewerNature Biotechnology, 2011
- CDD: a Conserved Domain Database for the functional annotation of proteinsNucleic Acids Research, 2010
- Signaling Pathways Mediating the Induction of Apple Fruitlet AbscissionPlant Physiology, 2010
- The genome of the domesticated apple (Malus × domestica Borkh.)Nature Genetics, 2010
- Control of bud activation by an auxin transport switchProceedings of the National Academy of Sciences, 2009
- MicroRNA-Mediated Regulation of Stomatal Development inArabidopsisThe Plant Cell, 2007
- The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and communityNucleic Acids Research, 2003
- A new mathematical model for relative quantification in real-time RT-PCRNucleic Acids Research, 2001