Complete genome analysis of the newly isolated Shigella sonnei phage vB_SsoM_Z31
Open Access
- 11 June 2021
- journal article
- research article
- Published by Springer Nature in Archives of Virology
- Vol. 166 (9) , 2597-2602
Abstract
This work describes the characterization and genome annotation of the newly isolated lytic phage vB_SsoM_Z31 (referred to as Z31), isolated from wastewater samples collected in Dalian, China. Transmission electron microscopy revealed that phage Z31 belongs to the family Myoviridae, order Caudovirales. This phage specifically infects Shigella sonnei, Shigella dysenteriae, and Escherichia coli. The genome of the phage Z31 is an 89,355-bp-long dsDNA molecule with a G+C content of 38.87%. It was predicted to contain 133 ORFs and encode 24 tRNAs. No homologs of virulence factor genes or antimicrobial resistance genes were found in this phage. Based on the results of nucleotide sequence alignment and phylogenetic analysis, phage Z31 was assigned to the genus Felixounavirus, subfamily Ounavirinae.Keywords
All Related Versions
Funding Information
- Agricultural Science and Technology Innovation Program of Jilin Province (CXGC2017JQ002)
This publication has 22 references indexed in Scilit:
- Role of Exercise in the Management of Diabetes Mellitus: the Global ScenarioPLOS ONE, 2013
- Isolation, characterization and comparative genomics of bacteriophage SfIV: a novel serotype converting phage from Shigella flexneriBMC Genomics, 2013
- Identification of acquired antimicrobial resistance genesJournal of Antimicrobial Chemotherapy, 2012
- Genomic and Proteomic Characterization of the Broad-Host-Range Salmonella Phage PVP-SE1: Creation of a New Phage GenusJournal of Virology, 2011
- Easyfig: a genome comparison visualizerBioinformatics, 2011
- Determining DNA Packaging Strategy by Analysis of the Termini of the Chromosomes in Tailed-Bacteriophage Virions2009
- Causes for the intriguing presence of tRNAs in phagesGenome Research, 2007
- Shigellaas a Foodborne Pathogen and Current Methods for Detection in FoodCritical Reviews in Food Science and Nutrition, 2006
- A Large, Multiple-Restaurant Outbreak of Infection with Shigella flexneri Serotype 2a Traced to TomatoesClinical Infectious Diseases, 2006
- Purification of Piscirickettsia salmonis and associated phage particlesDiseases of Aquatic Organisms, 2001