Global Transformer and Dual Local Attention Network via Deep-Shallow Hierarchical Feature Fusion for Retinal Vessel Segmentation
- 19 August 2022
- journal article
- research article
- Published by Institute of Electrical and Electronics Engineers (IEEE) in IEEE Transactions on Cybernetics
- Vol. 53 (9) , 5826-5839
Abstract
Clinically, retinal vessel segmentation is a significant step in the diagnosis of fundus diseases. However, recent methods generally neglect the difference of semantic information between deep and shallow features, which fail to capture the global and local characterizations in fundus images simultaneously, resulting in the limited segmentation performance for fine vessels. In this article, a global transformer (GT) and dual local attention (DLA) network via deep-shallow hierarchical feature fusion (GT-DLA-dsHFF) are investigated to solve the above limitations. First, the GT is developed to integrate the global information in the retinal image, which effectively captures the long-distance dependence between pixels, alleviating the discontinuity of blood vessels in the segmentation results. Second, DLA, which is constructed using dilated convolutions with varied dilation rates, unsupervised edge detection, and squeeze-excitation block, is proposed to extract local vessel information, consolidating the edge details in the segmentation result. Finally, a novel deep-shallow hierarchical feature fusion (dsHFF) algorithm is studied to fuse the features in different scales in the deep learning framework, respectively, which can mitigate the attenuation of valid information in the process of feature fusion. We verified the GT-DLA-dsHFF on four typical fundus image datasets. The experimental results demonstrate our GT-DLA-dsHFF achieves superior performance against the current methods and detailed discussions verify the efficacy of the proposed three modules. Segmentation results of diseased images show the robustness of our proposed GT-DLA-dsHFF. Implementation codes will be available on https://github.com/YangLibuaa/GT-DLA-dsHFF.Keywords
Funding Information
- National Natural Science Foundation of China (U1809209, 61671042, 61403016)
- Beijing Natural Science Foundation (L182015, 4172037)
- Beijing United Imaging Research Institute of Intelligent Imaging Foundation (CRIBJQY202103)
- British Heart Foundation (TG/18/5/34111, PG/16/78/32402)
- European Research Council (ERC), Innovative Medicines Initiative (101005122)
- Horizon 2020 Framework Programme (952172)
- Medical Research Council (MC/PC/21013)
- U.K. Research and Innovation (UKRI) Future Leaders Fellowship (MR/V023799/1)
- Zhejiang Lab’s International Talent Fund for Young Professionals
This publication has 52 references indexed in Scilit:
- Segmentation of the Blood Vessels and Optic Disk in Retinal ImagesIEEE Journal of Biomedical and Health Informatics, 2014
- An Ensemble Classification-Based Approach Applied to Retinal Blood Vessel SegmentationIEEE Transactions on Biomedical Engineering, 2012
- Retinal Imaging and Image AnalysisIEEE Reviews in Biomedical Engineering, 2010
- Segmentation of retinal blood vessels by combining the detection of centerlines and morphological reconstructionIEEE Transactions on Medical Imaging, 2006
- Ridge-Based Vessel Segmentation in Color Images of the RetinaIEEE Transactions on Medical Imaging, 2004
- Locating blood vessels in retinal images by piecewise threshold probing of a matched filter responseIEEE Transactions on Medical Imaging, 2000
- Rapid automated tracing and feature extraction from retinal fundus images using direct exploratory algorithmsIEEE Transactions on Information Technology in Biomedicine, 1999
- A fuzzy vessel tracking algorithm for retinal images based on fuzzy clusteringIEEE Transactions on Medical Imaging, 1998
- Detection of blood vessels in retinal images using two-dimensional matched filtersIEEE Transactions on Medical Imaging, 1989
- On the accuracy of the Sobel edge detectorImage and Vision Computing, 1983