Modulation of Allosteric Control and Evolution of Hemoglobin
Open Access
- 22 March 2023
- journal article
- review article
- Published by MDPI AG in Biomolecules
- Vol. 13 (3) , 572
Abstract
Allostery arises when a ligand-induced change in shape of a binding site of a protein is coupled to a tertiary/quaternary conformational change with a consequent modulation of functional properties. The two-state allosteric model of Monod, Wyman and Changeux [J. Mol. Biol. 1965; 12, 88–118] is an elegant and effective theory to account for protein regulation and control. Tetrameric hemoglobin (Hb), the oxygen transporter of all vertebrates, has been for decades the ideal system to test for the validity of the MWC theory. The small ligands affecting Hb’s behavior (organic phosphates, protons, bicarbonate) are produced by the red blood cell during metabolism. By binding to specific sites, these messengers make Hb sensing the environment and reacting consequently. HbI and HbIV from trout and human HbA are classical cooperative models, being similar yet different. They share many fundamental features, starting with the globin fold and the quaternary assembly, and reversible cooperative O2 binding. Nevertheless, they differ in ligand affinity, binding of allosteric effectors, and stability of the quaternary assembly. Here, we recollect essential functional properties and correlate them to the tertiary and quaternary structures available in the protein databank to infer on the molecular basis of the evolution of oxygen transporters.Keywords
This publication has 50 references indexed in Scilit:
- Presenting your structures: theCCP4mgmolecular-graphics softwareActa Crystallographica Section D Structural Biology, 2011
- Structural analysis of fish versus mammalian hemoglobins: Effect of the heme pocket environment on autooxidation and hemin lossProteins: Structure, Function, and Bioinformatics, 2009
- Allostery and cooperativity revisitedProtein Science, 2008
- 1.25 Å Resolution Crystal Structures of Human Haemoglobin in the Oxy, Deoxy and Carbonmonoxy FormsJournal of Molecular Biology, 2006
- Modulation of ligand binding in engineered human hemoglobin distal pocketJournal of Molecular Biology, 1999
- The Crystal Structures of Trout Hb I in the Deoxy and Carbonmonoxy FormsJournal of Molecular Biology, 1996
- Properties of trout HbI in water and ligand linked binding of Na+FEBS Letters, 1981
- Observations on CO trout hemoglobins by 13C NMRFEBS Letters, 1976
- A mathematical model for structure-function relations in hemoglobinJournal of Molecular Biology, 1972
- On the nature of allosteric transitions: A plausible modelJournal of Molecular Biology, 1965