Analysis of Transcriptional Responses of the Inflorescence Meristems in Jatropha curcas Following Gibberellin Treatment
Open Access
- 1 February 2018
- journal article
- research article
- Published by MDPI AG in International Journal of Molecular Sciences
- Vol. 19 (2) , 432
Abstract
Jatropha curcas L. seeds an oilseed plant with great potential for biodiesel production. However, low seed yield, which was limited by its lower female flowers, was a major drawback for its utilization. Our previous study found that the flower number and female-to-male ratio were increased by gibberellin treatment. Here, we compared the transcriptomic profiles of inflorescence meristem at different time points after gibberellic acid A3 (GA3) treatment. The present study showed that 951 differentially expressed genes were obtained in response to gibberellin treatment, compared with control samples. The 6-h time point was an important phase in the response to exogenous gibberellin. Furthermore, the plant endogenous gibberellin, auxin, ethylene, abscisic acid, and brassinolide-signaling transduction pathways were repressed, whereas the genes associated with cytokinin and jasmonic acid signaling were upregulated for 24-h time point following GA3 treatment. In addition, the floral meristem determinacy genes (JcLFY, JcSOC1) and floral organ identity genes (JcAP3, JcPI, JcSEP1-3) were significantly upregulated, but their negative regulator (JcSVP) was downregulated after GA3 treatment. Moreover, the effects of phytohormone, which was induced by exogenous plant growth regulator, mainly acted on the female floral differentiation process. To the best of our knowledge, this data is the first comprehensive analysis of the underlying transcriptional response mechanism of floral differentiation following GA3 treatment in J. curcas, which helps in engineering high-yielding varieties of Jatropha.Keywords
Funding Information
- Chinese Academy of Sciences (ZSZC-014)
This publication has 61 references indexed in Scilit:
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusionsGenome Biology, 2013
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and CufflinksNature Protocols, 2012
- Translatome and metabolome effects triggered by gibberellins during rosette growth in ArabidopsisJournal of Experimental Botany, 2012
- Gibberellin-GID1-DELLA: A Pivotal Regulatory Module for Plant Growth and DevelopmentPlant Physiology, 2010
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiationNature Biotechnology, 2010
- miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thalianaCell, 2009
- Gibberellin signalingPlanta, 2008
- Analyzing real-time PCR data by the comparative CT methodNature Protocols, 2008
- GA4 Is the Active Gibberellin in the Regulation ofLEAFYTranscription andArabidopsisFloral InitiationThe Plant Cell, 2006
- Different Plant Hormones Regulate Similar Processes through Largely Nonoverlapping Transcriptional ResponsesCell, 2006