Multi‐parametric artificial neural network fitting of phase‐cycled balanced steady‐state free precession data
- 1 June 2020
- journal article
- research article
- Published by Wiley in Magnetic Resonance in Medicine
- Vol. 84 (6) , 2981-2993
Abstract
Purpose: Standard relaxation time quantification using phase‐cycled balanced steady‐state free precession (bSSFP), eg, motion‐insensitive rapid configuration relaxometry (MIRACLE), is subject to a considerable underestimation of tissue T1 and T2 due to asymmetric intra‐voxel frequency distributions. In this work, an artificial neural network (ANN) fitting approach is proposed to simultaneously extract accurate reference relaxation times (T1, T2) and robust field map estimates ( , ΔB0) from the bSSFP profile.Methods: Whole‐brain bSSFP data acquired at 3T were used for the training of a feedforward ANN with N = 12, 6, and 4 phase‐cycles. The magnitude and phase of the Fourier transformed complex bSSFP frequency response served as input and the multi‐parametric reference set [T1, T2, , ∆B0] as target. The ANN predicted relaxation times were validated against the target and MIRACLE.Results: The ANN prediction of T1 and T2 for trained and untrained data agreed well with the reference, even for only four acquired phase‐cycles. In contrast, relaxometry based on 4‐point MIRACLE was prone to severe off‐resonance‐related artifacts. ANN predicted and ∆B0 maps showed the expected spatial inhomogeneity patterns in high agreement with the reference measurements for 12‐point, 6‐point, and 4‐point bSSFP phase‐cycling schemes.Conclusion: ANNs show promise to provide accurate brain tissue T1 and T2 values as well as reliable field map estimates. Moreover, the bSSFP acquisition can be accelerated by reducing the number of phase‐cycles while still delivering robust T1, T2, , and ∆B0 estimates.Keywords
Funding Information
- Max-Planck-Gesellschaft
- Deutsche Forschungsgemeinschaft (DFG SCHE 658/12)
This publication has 33 references indexed in Scilit:
- T2 Relaxometry and Diffusion Tensor Indices of the Hippocampus and Entorhinal Cortex Improve Sensitivity and Specificity of MRI to Detect Amnestic Mild Cognitive Impairment and Alzheimer's Disease DementiaJournal of Magnetic Resonance Imaging, 2018
- Value of quantitative magnetic resonance imaging T1-relaxometry in predicting contrast-enhancement in glioblastoma patientsOncotarget, 2017
- Longitudinal changes of cortical microstructure in Parkinson's disease assessed with T1 relaxometryNeuroImage: Clinical, 2017
- Quantification of Nonenhancing Tumor Burden in Gliomas Using Effective T2 Maps Derived from Dual-Echo Turbo Spin-Echo MRIClinical Cancer Research, 2015
- Relaxation time mapping in multiple sclerosisExpert Review of Neurotherapeutics, 2011
- Quantitative mapping of T1 and T2* discloses nigral and brainstem pathology in early Parkinson's diseaseNeuroImage, 2010
- Normal-Appearing Brain T1 Relaxation Time Predicts Disability in Early Primary Progressive Multiple SclerosisArchives of Neurology, 2007
- Whole-Brain T1 Mapping in Multiple Sclerosis: Global Changes of Normal-appearing Gray and White MatterRadiology, 2006
- In Vivo Evaluation of Brain Iron in Alzheimer Disease Using Magnetic Resonance ImagingArchives of General Psychiatry, 2000
- T1 and T2 in the Brain of Healthy Subjects, Patients with Parkinson Disease, and Patients with Multiple System Atrophy: Relation to Iron ContentRadiology, 1999