Characterization, Evolutionary Analysis, and Expression Pattern Analysis of the Heat Shock Transcription Factors and Drought Stress Response in Heimia myrtifolia
Open Access
- 16 May 2023
- journal article
- research article
- Published by MDPI AG in Horticulturae
- Vol. 9 (5) , 588
Abstract
Heat shock transcription factors (HSFs) are among the most important regulators of plant responses to abiotic stimuli. They play a key role in numerous transcriptional regulatory processes. However, the specific characteristics of HSF gene family members and their expression patterns in different tissues and under drought stress have not been precisely investigated in Heimia myrtifolia. This study analyzed transcriptome data from H. myrtifolia and identified 15 members of the HSF family. Using a phylogenetic tree, these members were classified into three major classes and fifteen groups. The amino acid physicochemical properties of these members were also investigated. The results showed that all HmHSF genes are located in the nucleus, and multiple sequence alignment analysis revealed that all HmHSF proteins have the most conserved DBD structural domains. Interestingly, a special HmHSF15 protein was found in the three-dimensional structure of the protein, which has a conserved structural domain that performs a function in addition to the unique structural domain of HSF proteins, resulting in a three-dimensional structure for HmHSF15 that is different from other HmHSF proteins. GO enrichment analysis shows that most HmHSFA-like genes are part of various biological processes associated with abiotic stresses. Finally, this study analyzed the tissue specificity of HmHSF genes in different parts of H. myrtifolia by qRT-PCR and found that HmHSF genes were more abundantly expressed in roots than in other tissues, and HmHSF05, HmHSF12, and HmHSF14 genes were different from other HSF genes, which could be further analyzed to verify their functionality. The results provide a basis for analyzing the functions of HmHSF genes in H. myrtifolia and help to explore the molecular regulatory mechanism of HmHSF in response to drought stress.Keywords
Funding Information
- Zhejiang Provincial Natural Science Foundation of China (LY21C160001, 31272494, LY16C170003)
- National Natural Science Foundation of China (LY21C160001, 31272494, LY16C170003)
- Zhejiang Provincial Natural Science Foundation of China (LY21C160001, 31272494, LY16C170003)
This publication has 42 references indexed in Scilit:
- Transcription Factors and Plants Response to Drought Stress: Current Understanding and Future DirectionsFrontiers in Plant Science, 2016
- Identification, classification, and expression profiles of heat shock transcription factors in tea plant (Camellia sinensis) under temperature stressGene, 2016
- Splice variants and seasonal expression of buffalo HSF genesCell Stress and Chaperones, 2015
- Genome-wide analysis of the Hsf family in soybean and functional identification of GmHsf-34 involvement in drought and heat stressesBMC Genomics, 2014
- Heat shock factors in carrot: genome-wide identification, classification, and expression profiles response to abiotic stressMolecular Biology Reports, 2014
- General mechanisms of drought response and their application in drought resistance improvement in plantsCellular and Molecular Life Sciences, 2014
- The transcriptional regulatory network in the drought response and its crosstalk in abiotic stress responses including drought, cold, and heatFrontiers in Plant Science, 2014
- Genome-wide identification, classification and expression analysis of the heat shock transcription factor family in Chinese cabbageMolecular Genetics and Genomics, 2014
- Genome-wide analysis of HSF family transcription factors and their responses to abiotic stresses in two Chinese cabbage varietiesActa Physiologiae Plantarum, 2013
- Heat shock transcriptional factors in Malus domestica: identification, classification and expression analysisBMC Genomics, 2012