Potential Prognostic Biomarkers of OSBPL Family Genes in Patients with Pancreatic Ductal Adenocarcinoma
Authors:
- Cheng-Wei ChouCCCheng-Wei Chou
- Yu-Hsiu HsiehYHYu-Hsiu Hsieh
- Su-Chi KuSKSu-Chi Ku
- Wan-Jou ShenWSWan-Jou Shen
- Gangga AnuragaGangga Anuraga
- Hoang Dang Khoa TaHoang Dang Khoa Ta
- Kuen-Haur LeeKuen-Haur Lee
- Yu-Cheng LeeYLYu-Cheng Lee
- Cheng-Hsien LinCLCheng-Hsien Lin
- Chih-Yang WangChih-Yang Wang
- Wei-Jan WangWWWei-Jan Wang
Open Access
- 3 November 2021
- journal article
- research article
- Published by MDPI AG in Biomedicines
- Vol. 9 (11) , 1601
Abstract
Pancreatic ductal adenocarcinoma (PDAC) is a highly fatal malignancy with poor survival outcomes. In addition, oxysterol-binding protein-like (OSBPL) family members are reported to be involved in lipid binding and transport and play critical roles in tumorigenesis. However, relationships between PDAC and OSBPL family members have not comprehensively been elucidated. In this study, we used the Oncomine and GEPIA 2 databases to analyze OSBPL transcription expressions in PDAC. The Kaplan–Meier plotter and TIMER 2.0 were used to assess the relationships between overall survival (OS) and immune-infiltration with OSBPL family members. Co-expression data from cBioPortal were downloaded to assess the correlated pathways with OSBPL gene family members using DAVID. The expressions of OSBPL3, OSBPL8, OSBPL10, and OSBPL11 were found to be highly upregulated in PDAC. Low expressions of OSBPL3, OSBPL8, and OSBPL10 indicated longer OS. The functions of OSBPL family members were mainly associated with several potential signaling pathways in cancer cells, including ATP binding, integrin binding, receptor binding, and the renin-angiotensin system (RAS) signaling pathway. The transcription levels of OSBPL gene family members were connected with several immune infiltrates. Collectively, OSBPL family members are influential biomarkers for the early diagnosis of PDAC and have prognostic value, with the promise of precise treatment of PDAC in the future.Keywords
Funding Information
- Ministry of Science and Technology, Taiwan (110-2320-B-039-068, 109-2320-B-038-009-MY2)
- China Medical University, Taiwan (CMU109-MF-55)
- Taipei Medical University (TMU-108-AE1-B16)
- Taichung Veterans General Hospital (TCVGH-1103702A)
This publication has 61 references indexed in Scilit:
- Tissue-based map of the human proteomeScience, 2015
- The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics DataCancer Discovery, 2012
- The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivityNature, 2012
- Expression of oxysterol binding protein isoforms in opisthorchiasis-associated cholangiocarcinoma: A potential molecular marker for tumor metastasisParasitology International, 2012
- The role of oxysterol binding protein‐related protein 5 in pancreatic cancerCancer Science, 2009
- FKBP51 Affects Cancer Cell Response to Chemotherapy by Negatively Regulating AktCancer Cell, 2009
- Transcriptome analysis of microdissected pancreatic intraepithelial neoplastic lesionsOncogene, 2005
- Expression of HOXB2, a Retinoic Acid Signaling Target in Pancreatic Cancer and Pancreatic Intraepithelial NeoplasiaClinical Cancer Research, 2005
- Gene Expression Profiling of Microdissected Pancreatic Ductal Carcinomas Using High-Density DNA MicroarraysNeoplasia, 2004
- Exploration of Global Gene Expression Patterns in Pancreatic Adenocarcinoma Using cDNA MicroarraysThe American Journal of Pathology, 2003