Informative priors contribute to quantifying the occurrence rate of a rare tree-related microhabitat in a managed forest
Preprint
Abstract
Tree-related microhabitats (TreMs) are key features for forest biodi-versity, and knowing their accumulation rate is essential to design inte-grative management strategies. Many types of TreMs are associated to large old trees and show slow ontogenical processes. The rarity of such TreMs (particularly in intensively managed forests) hinder the estimation of their occurrence rate along tree growth. Here, we used a continental meta-analysis on TreMs occurrence rate along tree growth to build in-formative priors for a model of trunk-base rot-hole occurrence on oaks within the Grésigne forest, France — a context where stand management and tree DBH were confounded. We explored whether the use of infor-mative priors could improve the identifiability, the precision of estimates and the predictive abilities of the model. Without prior information, the low variance of tree DBH within management modalities rendered the model poorly identifiable and prevented the detection of an effect of tree DBH per se across the range of explored tree DBH. By contrast, using informative priors contributed to improve the precision of estimates and lead to detecting a positive effect of tree DBH per se . Informative priors did not degrade the model fit and clearly improved predictive abilities on new stands. In particular, while the model without prior information did not predict the occurrence of trunk-base rot-holes significantly better than a purely random guess, the model with informative priors did. Ir-respective of the prior used, models suggested that the high recruitment of trunk-base rot-holes in Grésigne may be a temporary management ef-fect in stands undergoing conversion from coppice-with-standards to high forest through sprout thinning, which will lead to conservation issues for cavicolous saproxylic species when all conversions are complete. Because using informative priors was simple and beneficial in our study, it should be further explored in other local applied contexts to orientate forest man-agement.Keywords
All Related Versions
- Published version: Peer Community Journal, 6.
Funding Information
- Fondation pour la Recherche sur la Biodiversite
This publication has 31 references indexed in Scilit:
- Temporal Development of Microhabitats on Living Habitat Trees in Temperate European ForestsEcosystems, 2024
- Evidence of region‐wide bat population decline from long‐term monitoring and Bayesian occupancy models with empirically informed priorsEcology and Evolution, 2019
- The larger, the better? Effects of delayed diameter-limit cutting on old-growth attributes and saproxylic beetle diversity in temperate oak forestsEuropean Journal of Forest Research, 2018
- Tree related microhabitats in temperate and Mediterranean European forests: A hierarchical typology for inventory standardizationEcological Indicators, 2018
- Applying ecological model evaludation: Lessons learned with the forest dynamics model Samsara2Ecological Modelling, 2015
- The neglected tool in the Bayesian ecologist's shed: a case study testing informative priors' effect on model accuracyEcology and Evolution, 2014
- Key features for saproxylic beetle diversity derived from rapid habitat assessment in temperate forestsEcological Indicators, 2014
- Profiting from pilot studies: Analysing mortality using Bayesian models with informative priorsBasic and Applied Ecology, 2013
- Capsis: an open software framework and community for forest growth modellingAnnals of Forest Science, 2011
- Influence of tree characteristics and forest management on tree microhabitatsBiological Conservation, 2011