Genome-Wide Identification and Drought Stress-Responsive Expression Profiling of the FAD Gene Family in Pear
Open Access
Abstract
Fatty acid desaturase (FAD) is a rate-limiting enzyme catalyzing the biosynthesis of unsaturated fatty acids (UFAs) and participates in key physiological processes such as plant growth and development, fruit ripening, and stress responses by regulating membrane lipid composition. Using pear genome data, this study systematically identified FAD gene family members through bioinformatic analysis and characterized their drought-responsive expression patterns. Results revealed that 34 FAD family members were identified in pear, unevenly distributed across 12 chromosomes and classified into six subfamilies. Members within the same subfamily exhibited similar conserved domains and gene structures. Promoter element analysis demonstrated that pear FAD promoters contain cis-acting elements associated with plant growth and development, hormone responses, and abiotic stress responses. qRT-PCR expression profiling showed that PbrFAD23 and PbrFAD30 were significantly upregulated during the early stages of drought stress, followed by suppressed expression levels, suggesting their potential crucial regulatory roles in the initial drought response. Genome-wide identification of 34 PbrFAD family members highlighted that PbrFAD23 and PbrFAD30, with marked upregulation under early drought stress, exhibit prominent drought responsiveness. This study provides valuable resistance gene resources for molecular breeding of stress-tolerant pear varieties and establishes a theoretical foundation for functional characterization of key drought-resistant candidate genes in pear.Keywords
Funding Information
- Hebei Agriculture Research System (HBCT2024170204, 21422012321, C2022402006)
- Handan Science and Technology Plan Project (HBCT2024170204, 21422012321, C2022402006)
- Hebei Natural Science Foundation General Project (HBCT2024170204, 21422012321, C2022402006)
This publication has 31 references indexed in Scilit:
- Genome-wide identification of FAD gene family and their contributions to the temperature stresses and mutualistic and parasitic fungi colonization responses in bananaInternational Journal of Biological Macromolecules, 2022
- Influence of microwave roasting on chemical composition, oxidative stability and fatty acid composition of flaxseed (Linum usitatissimum L.) oilFood Chemistry, 2020
- TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological DataMolecular Plant, 2020
- Genome-wide analysis of fatty acid desaturase genes in rice (Oryza sativa L.)Scientific Reports, 2019
- Genome-wide identification, characterization and in-silico profiling of genes encoding FAD (fatty acid desaturase) proteins in chickpea (Cicer arietinum L.)Plant Gene, 2019
- Genome-Wide Survey and Characterization of Fatty Acid Desaturase Gene Family in Brassica napus and Its Parental SpeciesApplied Biochemistry and Biotechnology, 2017
- Genome-wide identification of membrane-bound fatty acid desaturase genes in Gossypium hirsutum and their expressions during abiotic stressScientific Reports, 2017
- Unsaturated Fatty Acids Stimulate Tumor Growth through Stabilization of β-CateninCell Reports, 2015
- Fatty acid desaturase-6 (Fad6) is required for salt tolerance in Arabidopsis thalianaBiochemical and Biophysical Research Communications, 2009
- The Sorghum bicolor genome and the diversification of grassesNature, 2009