Bacteriophage-Encoded DNA Polymerases—Beyond the Traditional View of Polymerase Activities
Open Access
- 7 January 2022
- journal article
- review article
- Published by MDPI AG in International Journal of Molecular Sciences
- Vol. 23 (2) , 635
Abstract
DNA polymerases are enzymes capable of synthesizing DNA. They are involved in replication of genomes of all cellular organisms as well as in processes of DNA repair and genetic recombination. However, DNA polymerases can also be encoded by viruses, including bacteriophages, and such enzymes are involved in viral DNA replication. DNA synthesizing enzymes are grouped in several families according to their structures and functions. Nevertheless, there are examples of bacteriophage-encoded DNA polymerases which are significantly different from other known enzymes capable of catalyzing synthesis of DNA. These differences are both structural and functional, indicating a huge biodiversity of bacteriophages and specific properties of their enzymes which had to evolve under certain conditions, selecting unusual properties of the enzymes which are nonetheless crucial for survival of these viruses, propagating as special kinds of obligatory parasites. In this review, we present a brief overview on DNA polymerases, and then we discuss unusual properties of different bacteriophage-encoded enzymes, such as those able to initiate DNA synthesis using the protein-priming mechanisms or even start this process without any primer, as well as able to incorporate untypical nucleotides. Apart from being extremely interesting examples of biochemical biodiversity, bacteriophage-encoded DNA polymerases can also be useful tools in genetic engineering and biotechnology.Keywords
Funding Information
- Institute of Biochemistry and Biophysics, Polish Academy of Sciences (PN-32)
This publication has 93 references indexed in Scilit:
- Replicative DNA PolymerasesCold Spring Harbor Perspectives in Biology, 2013
- Improvement of φ29 DNA polymerase amplification performance by fusion of DNA binding motifsProceedings of the National Academy of Sciences, 2010
- DNA polymerase Family X: Function, structure, and cellular rolesBiochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2010
- Maintaining genome stability at the replication forkNature Reviews Molecular Cell Biology, 2010
- Selective aluminum passivation for targeted immobilization of single DNA polymerase molecules in zero-mode waveguide nanostructuresProceedings of the National Academy of Sciences, 2008
- Structures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B‐family polymerasesThe EMBO Journal, 2007
- Multiple Functions of DNA PolymerasesCritical Reviews in Plant Sciences, 2007
- Replisome-Mediated DNA ReplicationAnnual Review of Biochemistry, 2001
- RECOMBINATION AND RECOMBINATION-DEPENDENT DNA REPLICATION IN BACTERIOPHAGE T4Annual Review of Genetics, 1998
- Crystal Structure of a pol α Family Replication DNA Polymerase from Bacteriophage RB69Cell, 1997