Structural insights into the Smirnoff–Wheeler pathway for vitamin C production in the Amazon fruit camu-camu
Authors:
- Jhon A VargasJVJhon A Vargas
- Susana A SculaccioSSSusana A Sculaccio
- Andressa P A PintoAPAndressa P A Pinto
- Humberto D’mUniz PereiraHPHumberto D’mUniz Pereira
- Luis F S MendesLMLuis F S Mendes
- Jhoao F FloresJFJhoao F Flores
- Marianela CobosMCMarianela Cobos
- Juan C CastroJCJuan C Castro
- Richard C GarrattRGRichard C Garratt
- Diego A LeonardoDLDiego A Leonardo
- 15 January 2024
- journal article
- research article
- Published by Oxford University Press (OUP) in Journal of Experimental Botany
- Vol. 75 (9) , 2754-2771
Abstract
L-Ascorbic acid (AsA, vitamin C) is a pivotal dietary nutrient with multifaceted importance in living organisms. In plants, the Smirnoff-Wheeler (SW) pathway is the primary route for AsA biosynthesis and understanding the mechanistic details behind its component enzymes has implications for plant biology, nutritional science and biotechnology. As part of an initiative to determine the structures of all six core enzymes of the pathway, the present study focusses on three of them from the model system Myrciaria dubia (camu-camu): GDP-D-mannose 3',5'-epimerase (GME), L-galactose dehydrogenase (L-GalDH), and L-galactono-1,4-lactone dehydrogenase (L-GalLDH). We provide insights into substrate and cofactor binding and the conformational changes they induce. The MdGME structure reveals a distorted substrate in the active site, pertinent to the catalytic mechanism. MdL-GalDH shows that the way in which NAD+ association affects loop structure over the active site is not conserved when compared with its homologue from spinach. Finally, the structure of MdL-GalLDH is described for the first time. This allows for the rationalization of previously identified residues which play important roles in the active site or in the formation of the covalent bond with the FAD. In conclusion, this study enhances our understanding of AsA biosynthesis in plants and the information provided should prove useful for biotechnological applications.Keywords
Funding Information
- Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (88887.505769/2020-00)
This publication has 68 references indexed in Scilit:
- l-Galactono-1,4-lactone dehydrogenase (GLDH) Forms Part of Three Subcomplexes of Mitochondrial Complex I in Arabidopsis thalianaJournal of Biological Chemistry, 2012
- The GeneOptimizer Algorithm: using a sliding window approach to cope with the vast sequence space in multiparameter DNA sequence optimizationSystems and Synthetic Biology, 2010
- Galactonolactone Dehydrogenase Requires a Redox-Sensitive Thiol for Optimal Production of Vitamin CPlant Physiology, 2009
- Gene expression studies in kiwifruit and gene over-expression in Arabidopsis indicates that GDP-L-galactose guanyltransferase is a major control point of vitamin C biosynthesisJournal of Experimental Botany, 2009
- Arabidopsis Phosphomannose Isomerase 1, but Not Phosphomannose Isomerase 2, Is Essential for Ascorbic Acid BiosynthesisJournal of Biological Chemistry, 2008
- The terminal step in vitamin C biosynthesis in Trypanosoma cruzi is mediated by a FMN-dependent galactonolactone oxidaseBiochemical Journal, 2007
- Inference of Macromolecular Assemblies from Crystalline StateJournal of Molecular Biology, 2007
- Phasercrystallographic softwareJournal of Applied Crystallography, 2007
- The missing step of the l -galactose pathway of ascorbate biosynthesis in plants, an l -galactose guanyltransferase, increases leaf ascorbate contentProceedings of the National Academy of Sciences, 2007
- Coot: model-building tools for molecular graphicsActa Crystallographica Section D Structural Biology, 2004