Tracking Topoisomerase Activity at the Single-Molecule Level
- 1 June 2005
- journal article
- review article
- Published by Annual Reviews in Annual Review of Biophysics
- Vol. 34 (1) , 201-219
Abstract
▪ Abstract The recent development of new techniques to manipulate single DNA molecules has opened new opportunities for the study of the enzymes that control DNA topology: the type I and II topoisomerases. These single-molecule assays provide a unique way to study the uncoiling of single supercoiled DNA molecules and the unlinking of two intertwined DNAs. They allow for a detailed characterization of the activity of topoisomerases, including the processivity, the chiral discrimination, and the dependence of their enzymatic rate on ATP concentration, degree of supercoiling, and the tension in the molecule. These results shed new light on the mechanism of these enzymes and their function in vivo.Keywords
This publication has 53 references indexed in Scilit:
- Twisting DNA: single molecule studiesContemporary Physics, 2004
- The Mechanochemistry of Molecular MotorsBiophysical Journal, 2000
- Pre-Steady-State Analysis of ATP Hydrolysis by Saccharomyces cerevisiae DNA Topoisomerase II. 2. Kinetic Mechanism for the Sequential Hydrolysis of Two ATPBiochemistry, 1998
- Two Distinct Modes of Strand Unlinking during θ-Type DNA ReplicationJournal of Biological Chemistry, 1996
- The Elasticity of a Single Supercoiled DNA MoleculeScience, 1996
- Structure and mechanism of DNA topoisomerase IINature, 1996
- Adhesion Forces Between Individual Ligand-Receptor PairsScience, 1994
- Structure of plectonemically supercoiled DNAJournal of Molecular Biology, 1990
- Interaction between DNA and an Escherichia coli protein ωJournal of Molecular Biology, 1971
- Self-Linking and the Gauss Integral in Higher DimensionsAmerican Journal of Mathematics, 1969