Transmembrane channel-like 4 and 5 proteins at microvillar tips are potential ion channels and lipid scramblases
Preprint
Abstract
Microvilli—membrane bound actin protrusions on the surface of epithelial cells—are sites of critical processes including absorption, secretion, and adhesion. Increasing evidence suggests microvilli are mechanosensitive, but underlying molecules and mechanisms remain unknown. Here, we localize transmembrane channel-like proteins 4 and 5 (TMC4 and 5) and calcium and integrin binding protein 3 (CIB3) to microvillar tips in intestinal epithelial cells, near glycocalyx insertion sites. We find that TMC5 colocalizes with CIB3 in cultured cells and that a TMC5 fragment forms a complex with CIB3 in vitro . Homology and AlphaFold2 models reveal a putative ion permeation pathway in TMC4 and 5, and molecular dynamics simulations predict both proteins can conduct ions and perform lipid scrambling. These findings raise the possibility that TMC4 and 5 interact with CIB3 at microvillar tips to form a mechanosensitive complex, akin to TMC1 and 2, and CIB2 and 3, within the mechanotransduction channel complex at the tips of inner ear stereocilia.Keywords
This publication has 68 references indexed in Scilit:
- NMRFx Processor: a cross-platform NMR data processing programJournal of Biomolecular NMR, 2016
- CHARMM36 all-atom additive protein force field: Validation based on comparison to NMR dataJournal of Computational Chemistry, 2013
- Loss-of-function of MYO5B is the main cause of microvillus inclusion disease: 15 novel mutations and a CaCo-2 RNAi cell modelHuman Mutation, 2010
- The Human Protein Atlas—a tool for pathologyThe Journal of Pathology, 2008
- CHARMM‐GUI: A web‐based graphical user interface for CHARMMJournal of Computational Chemistry, 2008
- Suppression of anti-TROSY lines in a sensitivity enhanced gradient selection TROSY schemeJournal of Biomolecular NMR, 2005
- UCSF Chimera—A visualization system for exploratory research and analysisJournal of Computational Chemistry, 2004
- Intrinsically unstructured proteins: re-assessing the protein structure-function paradigmJournal of Molecular Biology, 1999
- Computer Visualization of Three-Dimensional Image Data Using IMODJournal of Structural Biology, 1996
- Targeted molecular dynamics: A new approach for searching pathways of conformational transitionsJournal of Molecular Graphics, 1994