Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels
- 12 January 2017
- journal article
- bioenergy and-biofuels
- Published by Springer Nature in Applied Microbiology and Biotechnology
- Vol. 101 (6) , 2603-2618
Abstract
Recently, several endophytic fungi have been demonstrated to produce volatile organic compounds (VOCs) with properties similar to fossil fuels, called “mycodiesel,” while growing on lignocellulosic plant and agricultural residues. The fact that endophytes are plant symbionts suggests that some may be able to produce lignocellulolytic enzymes, making them capable of both deconstructing lignocellulose and converting it into mycodiesel, two properties that indicate that these strains may be useful consolidated bioprocessing (CBP) hosts for the biofuel production. In this study, four endophytes Hypoxylon sp. CI4A, Hypoxylon sp. EC38, Hypoxylon sp. CO27, and Daldinia eschscholzii EC12 were selected and evaluated for their CBP potential. Analysis of their genomes indicates that these endophytes have a rich reservoir of biomass-deconstructing carbohydrate-active enzymes (CAZys), which includes enzymes active on both polysaccharides and lignin, as well as terpene synthases (TPSs), enzymes that may produce fuel-like molecules, suggesting that they do indeed have CBP potential. GC-MS analyses of their VOCs when grown on four representative lignocellulosic feedstocks revealed that these endophytes produce a wide spectrum of hydrocarbons, the majority of which are monoterpenes and sesquiterpenes, including some known biofuel candidates. Analysis of their cellulase activity when grown under the same conditions revealed that these endophytes actively produce endoglucanases, exoglucanases, and β-glucosidases. The richness of CAZymes as well as terpene synthases identified in these four endophytic fungi suggests that they are great candidates to pursue for development into platform CBP organisms.Keywords
Funding Information
- Laboratory Directed Research and Development
This publication has 61 references indexed in Scilit:
- Mind the Gap: Upgrading Genomes with Pacific Biosciences RS Long-Read Sequencing TechnologyPLOS ONE, 2012
- Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)BMC Ecology and Evolution, 2012
- A Novel Biochemical Route for Fuels and Chemicals Production from Cellulosic BiomassPLOS ONE, 2012
- Glycoside Hydrolase Activities of Thermophilic Bacterial Consortia Adapted to SwitchgrassApplied and Environmental Microbiology, 2011
- Metabolic Engineering of Clostridium cellulolyticum for Production of Isobutanol from CelluloseApplied and Environmental Microbiology, 2011
- High-quality draft assemblies of mammalian genomes from massively parallel sequence dataProceedings of the National Academy of Sciences, 2010
- Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq readsBMC Genomics, 2010
- Systems analysis of plant cell wall degradation by the model filamentous fungus Neurospora crassaProceedings of the National Academy of Sciences, 2009
- Transcriptome analysis by strand-specific sequencing of complementary DNANucleic Acids Research, 2009
- The genome sequence of the filamentous fungus Neurospora crassaNature, 2003