An asymmetric logistic regression model for ecological data
Open Access
- 15 October 2015
- journal article
- Published by Wiley in Methods in Ecology and Evolution
- Vol. 7 (2) , 249-260
Abstract
Summary: Binary data are popular in ecological and environmental studies; however, due to various uncertainties and complexities present in data sets, the standard generalized linear model with a binomial error distribution often demonstrates insufficient predictive performance when analysing binary and proportional data. To address this difficulty, we propose an asymmetric logistic regression model that uses a new parameter to account for data complexity. We observe that this parameter controls the model's asymmetry and is important for adjusting the weights associated with observed data in order to improve model fitting. This model includes the ordinary logistic regression model as a special case. It is easily implemented using a slight modification ofglmorglmerin statistical softwareR. Simulation studies suggest that our new approach outperforms a traditional approach in terms of both predictive accuracy and variable selection. In a case study involving fisheries data, we found that the annual catch amount had a greater impact on stock status prediction, and improved predictive capability was supported with a smaller AIC compared to a generalized linear model. In summary, our method can enhance the applicability of a generalized linear model to various ecological problems using a slight modification, and significantly improves model fitting and model selection.Keywords
Funding Information
- Japan Science and Technology Agency
- Core Research for Evolutional Science and Technology
This publication has 41 references indexed in Scilit:
- An insight into classification with imbalanced data: Empirical results and current trends on using data intrinsic characteristicsInformation Sciences, 2013
- Evaluating methods that classify fisheries stock status using only fisheries catch dataFisheries Research, 2012
- Unexpected patterns of fisheries collapse in the world's oceansProceedings of the National Academy of Sciences, 2011
- L1Penalized Estimation in the Cox Proportional Hazards ModelBiometrical Journal, 2010
- Rebuilding Global FisheriesScience, 2009
- Impacts of Biodiversity Loss on Ocean Ecosystem ServicesScience, 2006
- An improved approach for predicting the distribution of rare and endangered species from occurrence and pseudo‐absence dataJournal of Applied Ecology, 2004
- Robustifying AdaBoost by Adding the Naive Error RateNeural Computation, 2004
- Standardization of bluefin tuna, Thunnus thynnus, catch per unit effort in the baitboat fishery of the Bay of Biscay (Eastern Atlantic)ICES Journal of Marine Science, 2003
- The Estimation of Choice Probabilities from Choice Based SamplesEconometrica, 1977