The genome sequence of the devil’s coach horse, Ocypus olens (Müller, 1764)
Authors:
- Liam M. CrowleyLCLiam M. Crowley
- University of OxfordUOUniversity of Oxford
- Wytham Woods Genome Acquisition LabWLWytham Woods Genome Acquisition Lab
- Darwin Tree of Life Barcoding collectiveDCDarwin Tree of Life Barcoding collective
- Wellcome Sanger Institute Tree of Life programmeWPWellcome Sanger Institute Tree of Life programme
- Wellcome Sanger Institute Scientific Operations: DNA Pipelines collectiveWCWellcome Sanger Institute Scientific Operations: DNA Pipelines collective
- Tree of Life Core Informatics collectiveTCTree of Life Core Informatics collective
- Darwin Tree of Life ConsortiumDCDarwin Tree of Life Consortium
Open Access
- 3 November 2021
- journal article
- data note
- Published by F1000 Research Ltd in Wellcome Open Research
- Vol. 6, 293
Abstract
We present a genome assembly from an individual female Ocypus olens (the devil’s coach horse; Arthropoda; Insecta; Coleoptera; Staphylinidae). The genome sequence is 1,084 megabases in span. The majority (98.81%) of the assembly is scaffolded into 20 chromosomal pseudomolecules, with the X sex chromosome assembled.Keywords
Funding Information
- Wellcome Trust (206194, 218328)
This publication has 12 references indexed in Scilit:
- Haplotype-resolved de novo assembly using phased assembly graphs with hifiasmNature Methods, 2021
- Significantly improving the quality of genome assemblies through curationGigaScience, 2021
- BlobToolKit – Interactive Quality Assessment of Genome AssembliesG3: Genes, Genomes, Genetics, 2020
- Identifying and removing haplotypic duplication in primary genome assembliesBioinformatics, 2020
- Integrating Hi-C links with assembly graphs for chromosome-scale assemblyPLOS Computational Biology, 2019
- HiGlass: web-based visual exploration and analysis of genome interaction mapsGenome Biology, 2018
- gEVAL — a web-based browser for evaluating genome assembliesBioinformatics, 2016
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin LoopingCell, 2014
- PREDATORY BEHAVIOUR ON GROUND BEETLES (COLEOPTERA: CARABIDAE) BY OCYPUS OLENS (MÜLLER) (COLEOPTERA: STAPHYLINIDAE) UNDER LABORATORY CONDITIONSEntomological News, 2006
- Aspects of the biology of Staphylinus olens (Müller), Britain's largest Staphylinid beetleEcological Entomology, 1976