Selection conditions affect the evolution of specific mutations in the reverse transcriptase gene associated with resistance to DMP 266

Authors:
  • SGSena Garber
    Sena Garber
  • CRCarol Reid
    Carol Reid
  • HSHelen Scarnati
    Helen Scarnati
  • DBDavid Baker
    David Baker
  • MRMarlene M. Rayner
    Marlene M. Rayner
  • EAElizabeth D. Anton
    Elizabeth D. Anton

Abstract
To compare heat denaturation and acidification as immune complex dissociation (ICD) methods in adult HIV-1 infection and to increase the sensitivity by a signal-amplification-boosted HIV-1 p24 antigen enzyme-linked immunosorbent assay (ELISA). Prospective and retrospective blinded study of paired serum and plasma samples from 245 patients (112 of class A, 66 of B, 67 of C of the Centers for Disease Control and Prevention 1993 classification). Plasma and sera were prospectively tested for antigen by ELISA using native, acidified, or heat-denatured material. Retrospective tests included batch analysis of heat-denatured samples for antigen by the signal-amplification-boosted ELISA and for viral RNA. With serum, native antigen was reactive in 26.5%. Acidification increased the rate to 53.1% (P ≤ 0.0001), but was inefficient at a CD4 + count ≥ 500 × 106/l. Heat denaturation further elevated the rate to 67.8% (P ≤ 0.0007) and the use of plasma to 78.0% (P ≤ 0.008). The boosted ELISA, performed with plasma samples diluted 1:6, which eliminated the problem of heat-induced sample coagulation, was confirmed positive in 89.5% of serum and 97.8% of plasma samples. RNA was detected in 95.7%. Heat-mediated ICD combined with a signal-amplification-boosted ELISA detects HIV-1 expression as sensitively as a polymerase chain reaction kit for viral RNA, but at only a fraction of the cost. The procedure uses a 50 μl plasma sample and should be fully automatable.