Genetic pleiotropy between mood disorders, metabolic, and endocrine traits in a multigenerational pedigree
Open Access
- 12 October 2018
- journal article
- research article
- Published by Springer Nature in Translational Psychiatry
- Vol. 8 (1) , 1-12
Abstract
Bipolar disorder (BD) is a mental disorder characterized by alternating periods of depression and mania. Individuals with BD have higher levels of early mortality than the general population, and a substantial proportion of this is due to increased risk for comorbid diseases. To identify the molecular events that underlie BD and related medical comorbidities, we generated imputed whole-genome sequence data using a population-specific reference panel for an extended multigenerational Old Order Amish pedigree (n = 394), segregating BD and related disorders. First, we investigated all putative disease-causing variants at known Mendelian disease loci present in this pedigree. Second, we performed genomic profiling using polygenic risk scores (PRS) to establish each individual’s risk for several complex diseases. We identified a set of Mendelian variants that co-occur in individuals with BD more frequently than their unaffected family members, including the R3527Q mutation inAPOBassociated with hypercholesterolemia. Using PRS, we demonstrated that BD individuals from this pedigree were enriched for the same common risk alleles for BD as the general population (β = 0.416,p = 6 × 10−4). Furthermore, we find evidence for a common genetic etiology between BD risk and polygenic risk for clinical autoimmune thyroid disease (p = 1 × 10−4), diabetes (p = 1 × 10−3), and lipid traits such as triglyceride levels (p = 3 × 10−4) in the pedigree. We identify genomic regions that contribute to the differences between BD individuals and unaffected family members by calculating local genetic risk for independent LD blocks. Our findings provide evidence for the extensive genetic pleiotropy that can drive epidemiological findings of comorbidities between diseases and other complex traits.Keywords
All Related Versions
Funding Information
- National Institute of Mental Health (R01MH093415)
This publication has 63 references indexed in Scilit:
- Genetic Mapping and Exome Sequencing Identify Variants Associated with Five Novel DiseasesPLOS ONE, 2012
- Abundant Pleiotropy in Human Complex Diseases and TraitsThe American Journal of Human Genetics, 2011
- Clan Genomics and the Complex Architecture of Human DiseaseCell, 2011
- Thyroid Functions and Bipolar Affective DisorderJournal of Thyroid Research, 2011
- Familial Defective Apolipoprotein B-100 and Increased Low-Density Lipoprotein Cholesterol and Coronary Artery Calcification in the Old Order AmishArchives of internal medicine (1960), 2010
- Variance component model to account for sample structure in genome-wide association studiesNature Genetics, 2010
- Human Genome Sequencing Using Unchained Base Reads on Self-Assembling DNA NanoarraysScience, 2010
- A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association StudiesPLOS Genetics, 2009
- Elevated Prevalence of Obesity, Metabolic Syndrome, and Cardiovascular Risk Factors in Bipolar DisorderAnnals of Clinical Psychiatry, 2008
- Examining a Bidirectional Association Between Depressive Symptoms and DiabetesJAMA, 2008