Microarray screening and qRT‐PCR evaluation of microRNA markers for forensic body fluid identification
- 10 June 2014
- journal article
- research article
- Published by Wiley in Electrophoresis
- Vol. 35 (21-22) , 3062-3068
Abstract
MicroRNAs (miRNA) are a class of small (∼22 nucleotides) noncoding RNAs that regulate diverse biological processes at the post‐transcriptional level. MiRNAs have great potential for forensic body fluid identification because they are expressed in a tissue specific manner and are less prone to degradation. Previous studies reported several miRNAs as body fluid specific, but there are few overlaps among them. Here, we used a genome‐wide miRNA microarray containing over 1700 miRNAs to assay 20 body fluid samples and identify novel miRNAs useful for forensic body fluid identification. Based on Shannon Entropy and Q‐statistics, 203 miRNAs specifically expressed in each body fluid were first selected. Eight miRNAs were then selected as novel forensically relevant miRNA markers: miR‐484 and miR‐182 for blood, miR‐223 and miR‐145 for saliva, miR‐2392 and miR‐3197 for semen, and miR‐1260b and miR‐654–5p for vaginal secretions. When the eight selected miRNAs were evaluated in 40 additional body fluid samples by qRT‐PCR, they showed high sensitivity and specificity for the identification of the target body fluid. We suggest that the eight miRNAs may be candidates for developing an effective molecular assay for forensic body fluid identification.Keywords
Funding Information
- Supreme Prosecutor's Office (FSRP-2013)
This publication has 36 references indexed in Scilit:
- Sensitivity and specificity of presumptive tests for blood, saliva and semenForensic Science, Medicine and Pathology, 2014
- Forensic DNA methylation profiling—Potential opportunities and challengesForensic Science International: Genetics, 2013
- Circulating MicroRNA for the Identification of Forensically Relevant Body Fluids2013
- Evaluation of mRNA marker specificity for the identification of five human body fluids by capillary electrophoresisForensic Science International: Genetics, 2012
- Expression of statherin mRNA and protein in nasal and vaginal secretionsLegal Medicine, 2011
- mRNA profiling for the identification of blood—Results of a collaborative EDNAP exerciseForensic Science International: Genetics, 2011
- The sensitivity and specificity of the RSID™-saliva kit for the detection of human salivary amylase in the Forensic Science Laboratory, Dublin, IrelandForensic Science International, 2010
- New markers for old stains: stable mRNA markers for blood and saliva identification from up to 16-year-old stainsInternational journal of legal medicine, 2008
- An enzyme-linked immunosorbent assay (ELISA) for prostate-specific antigenForensic Science International, 1991
- Detection of human hemoglobin A (HbA) and human hemoglobin F (HbF) in biological stains by microtiter latex agglutination-inhibition testForensic Science International, 1990