A thermoacidophilic endoglucanase (CelB) from Alicyclobacillus acidocaldarius displays high sequence similarity to arabinofuranosidases belonging to family 51 of glycoside hydrolases
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Open Access
- 4 August 2003
- journal article
- website
- Published by Wiley in European Journal of Biochemistry
- Vol. 270 (17) , 3593-3602
Abstract
A 100‐kDa protein with endoglucanase activity was purified from Triton X‐100 extract of cells of the thermoacidophilic Gram‐positive bacterium Alicyclobacillus acidocaldarius. The enzyme exhibited activity towards carboxy methyl cellulose and oat spelt xylan with pH and temperature optima of 4 and 80 °C, respectively. Cloning and nucleotide sequence analysis of the corresponding gene (celB) revealed an ORF encoding a preprotein of 959 amino acids which is consistent with an extracellular localization. Purified recombinant CelB and a variant lacking the C‐terminal 203 amino acid residues (CelBtrunc) displayed similar enzymatic properties as the wild‐type protein. Analysis of product formation suggested an endo mode of action. Remarkable stability was observed at pH values between 1 and 7 and 60% of activity were retained after incubation for 1 h at 80 °C. CelB displayed homology to members of glycoside hydrolase family 51, being only the second entry with activity typical of an endoglucanase but lacking activity on p‐nitrophenyl‐α‐l‐arabinofuranoside (pNPAraf). Highest sequence similarity was found towards the other endoglucanase F from Fibrobacter succinogenes (EGF), forming a distinct group in the phylogenetic tree of this family. Analysis of the amino acid composition of the catalytic domains demonstrated that CelB contains fewer charged amino acids than its neutrophilic counterparts, which is in line with adaptation to low pH. Wild‐type and full‐length recombinant CelB were soluble only in Triton X‐100. In contrast, CelBtrunc was completely water soluble, suggesting a role of the C‐terminal region in cell association. This C‐terminal hydrophobic region displayed local sequence similarities to an α‐amylase from the same organism.Keywords
This publication has 46 references indexed in Scilit:
- The identification of the acid–base catalyst of α‐arabinofuranosidase from Geobacillus stearothermophilus T‐6, a family 51 glycoside hydrolaseFEBS Letters, 2002
- A comparative study of two retaining enzymes of Trichoderma reesei: transglycosylation of oligosaccharides catalysed by the cellobiohydrolase I, Cel7A, and the β‐mannanase, Man5AFEBS Letters, 1999
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 1997
- Maltose transport in Aeromonas hydrophila: purification, biochemical characterization and partial protein sequence analysis of a periplasmic maltose-binding proteinMicrobiology, 1994
- Alteration of the cleavage mode and of the transglycosylation reactions of the xylanase A of Streptomyces lividans 1326 by site‐directed mutagenesis of the Asn173 residueEuropean Journal of Biochemistry, 1994
- Cloning and sequencing of a gene encoding acidophilic amylase from Bacillus acidocaldariusJournal of General Microbiology, 1993
- Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mpl8 and pUC19 vectorsGene, 1985
- A simple method for displaying the hydropathic character of a proteinJournal of Molecular Biology, 1982
- Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.Proceedings of the National Academy of Sciences, 1979
- Bacillus acidocaldarius sp.nov., an Acidophilic Thermophilic Spore-forming BacteriumJournal of General Microbiology, 1971