EMDB—the Electron Microscopy Data Bank

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Abstract
The Electron Microscopy Data Bank (EMDB) is the global public archive of three-dimensional electron microscopy (3DEM) maps of biological specimens derived from transmission electron microscopy experiments. As of 2021, EMDB is managed by the Worldwide Protein Data Bank consortium (wwPDB; wwpdb.org) as a wwPDB Core Archive, and the EMDB team is a core member of the consortium. Today, EMDB houses over 30 000 entries with maps containing macromolecules, complexes, viruses, organelles and cells. Herein, we provide an overview of the rapidly growing EMDB archive, including its current holdings, recent updates, and future plans.
Funding Information
  • European Molecular Biology Laboratory
  • European Bioinformatics Institute
  • Wellcome Trust (212977/Z/18/Z, 218303/Z/19/Z, 104948/Z/14/Z)
  • Biotechnology and Biological Sciences Research Council (BB/P025846/1, BB/V004247/1, 20-BBSRC/NSF-BIO)
  • National Science Foundation (DBI-1832184)
  • US Department of Energy (DESC0019749)
  • National Cancer Institute
  • National Institute of Allergy and Infectious Diseases
  • National Institute of General Medical Sciences (R01GM133198)
  • National Institutes of Health (R01GM109046)
  • UK Biotechnology and Biological Research Council (DBI-2019297, BB/V004247/1)
  • new Mol* features (DBI-2129634, BB/W017970/1)
  • Department of NBDC program, Japan Science and Technology Agency (JPMJND2205)
  • AMED (23ama121001)
  • Institute for Protein Research, Osaka University
  • Shanghai Advanced Research Institute (SARI), Chinese Academy of Sciences and the ShanghaiTech University
  • Ministry of Electronics and Information technology (CORP:DG:3191)
  • National Supercomputing Mission program
  • Indian National Science Academy

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