Molecular aspects of Omicron, vaccine development, and recombinant strain XE: A review
- 27 June 2022
- journal article
- review article
- Published by Wiley in Journal of Medical Virology
- Vol. 94 (10) , 4628-4643
Abstract
The global pandemic of COVID‐19 began in December 2019 and is still continuing. The past 2 years have seen the emergence of several variants that were more vicious than each other. The emergence of Omicron (B.1.1.529) proved to be a huge epidemiological concern as the rate of infection of this particular strain was enormous. The strain was identified in South Africa on November 24, 2021 and was classified as a “Variant of Concern” on November 26, 2021. The Omicron variant possessed mutations in the key RBD region, the S region, thereby increasing the affinity of ACE2 for better transmission of the virus. Antibody resistance was found in this variant and it was able to reduce vaccine efficiency of vaccines. The need for a booster vaccine was brought forth due to the prevalence of the Omicron variant and, subsequently, this led to targeted research and development of variant‐specific vaccines and booster dosage. This review discusses broadly the genomic characters and features of Omicron along with its specific mutations, evolution, antibody resistance, and evasion, utilization of CRISPR‐Cas12a assay for Omicron detection, T‐cell immunity elicited by vaccines against Omicron, and strategies to decrease Omicron infection along with COVID‐19 and it also discusses on XE recombinant variant and on infectivity of BA.2 subvariant of Omicron.Keywords
This publication has 105 references indexed in Scilit:
- Mutations in SARS-CoV-2; Consequences in structure, function, and pathogenicity of the virusMicrobial Pathogenesis, 2021
- Strategy for COVID-19 vaccination in India: the country with the second highest population and number of casesnpj Vaccines, 2021
- Structural basis for bivalent binding and inhibition of SARS-CoV-2 infection by human potent neutralizing antibodiesCell Research, 2021
- Two-step strategy for the identification of SARS-CoV-2 variant of concern 202012/01 and other variants with spike deletion H69–V70, France, August to December 2020Eurosurveillance, 2021
- SARS-CoV-2 neutralizing antibody structures inform therapeutic strategiesNature, 2020
- Genome-wide analysis of SARS-CoV-2 virus strains circulating worldwide implicates heterogeneityScientific Reports, 2020
- ACE2, TMPRSS2, and Furin variants and SARS‐CoV‐2 infection in Madrid, SpainJournal of Medical Virology, 2020
- The novel coronavirus 2019-nCoV: Its evolution and transmission into humans causing global COVID-19 pandemicInternational Journal of Environmental Science and Technology, 2020
- Replication of MERS and SARS coronaviruses in bat cells offers insights to their ancestral originsEmerging Microbes & Infections, 2018
- Propionibacterium acnes induces intervertebral disc degeneration by promoting nucleus pulposus cell apoptosis via the TLR2/JNK/mitochondrial-mediated pathwayEmerging Microbes & Infections, 2018