16S rRNA gene profiling of planktonic and biofilm microbial populations in the Gulf of Guinea using Illumina NGS

This publication has 44 references indexed in Scilit:

• Microbial Surface Colonization and Biofilm Development in Marine Environments
  Microbiology and Molecular Biology Reviews, 2016
• Trimmomatic: a flexible trimmer for Illumina sequence data
  Bioinformatics, 2014
• UPARSE: highly accurate OTU sequences from microbial amplicon reads
  Nature Methods, 2013
• Molecular characterization of putative biocorroding microbiota with a novel niche detection of Epsilon ‐ and Zetaproteobacteria in Pacific Ocean coastal seawaters
  Environmental Microbiology, 2011
• Water mass-specificity of bacterial communities in the North Atlantic revealed by massively parallel sequencing
  Molecular Ecology, 2010
• Search and clustering orders of magnitude faster than BLAST
  Bioinformatics, 2010
• QIIME allows analysis of high-throughput community sequencing data
  Nature Methods, 2010
• Cross-Ocean Distribution of Rhodobacterales Bacteria as Primary Surface Colonizers in Temperate Coastal Marine Waters
  Applied and Environmental Microbiology, 2008
• Bacterial activity and community composition in stream water and biofilm from an urban river determined by fluorescent in situ hybridization and DGGE analysis
  FEMS Microbiology Ecology, 2003
• Numerical Dominance and Phylotype Diversity of Marine Rhodobacter Species during Early Colonization of Submerged Surfaces in Coastal Marine Waters as Determined by 16S Ribosomal DNA Sequence Analysis and Fluorescence In Situ Hybridization
  Applied and Environmental Microbiology, 2002