The diversity of prokaryotes and fungi hosted in crude oils
Open Access
- 1 July 2025
- journal article
- Published by American Society for Microbiology in Microbiology Spectrum
- Vol. 13 (7) , e0168924
Abstract
The diversity of prokaryotes and fungi in crude oils has not been understood clearly, though unique microbial communities may be hosted in crude oil. This study investigated the chemical compositions and microbial communities of crude oils from Henan, Bamianhe, and Jianghan oilfields of China. Statistical analysis revealed significant variations of both prokaryotic and fungal communities ( P < 0.05) within different oilfields and oils with different biodegradation levels. Diversity analysis showed little difference in prokaryotic, but a significant difference in fungal ( P < 0.05). Prokaryotic diversity was higher in heavily biodegraded oils than those in unaltered and slightly biodegraded oils; the opposite was true for fungal diversity ( P < 0.05). Moreover, thermophilic prokaryotes were detected mainly in biodegraded heavy oils produced by the practice of thermal recovery from Henan and Bamianhe oilfields, and halophilic prokaryotes were detected mainly in oils from sandstone reservoirs containing hypersaline formation water from Jianghan Oilfield. Accordingly, microbial communities in oils are affected by oil biodegradation, extraction practices, and natural environments of native inhabitants in subsurface petroleum reservoirs. IMPORTANCE: The biological activities of endogenous microorganisms in crude oil play an important role in the production and development of crude oil. Although there have been many microbiological investigations of crude oil-contaminated sites, our understanding of the phylogenetic diversity, metabolic capabilities, and community dynamics of microbial communities within crude oil is far from complete. In this paper, the prokaryotic and fungal communities of three oil fields in different regions of China were analyzed, and several factors affecting microbial degradation were further identified. This study provides a new direction for the subsequent investigation of microbial activities inside crude oil.Keywords
This publication has 77 references indexed in Scilit:
- Bacterial and Archaeal Community Distribution in Oilfield Water Re-injection Facilities and the Influences from Microorganisms in Injected WaterMicrobial Ecology, 2021
- Removal and biodegradation of different petroleum hydrocarbons using the filamentous fungus Aspergillus sp. RFC‐1Microbiologyopen, 2018
- Microbial diversity in degraded and non-degraded petroleum samples and comparison across oil reservoirs at local and global scalesExtremophiles, 2016
- Indigenous oil-degrading bacteria in crude oil-contaminated seawater of the Yellow sea, ChinaApplied Microbiology and Biotechnology, 2014
- Coriolopsis rigida, a potential model of white-rot fungi that produce extracellular laccasesJournal of Industrial Microbiology and Biotechnology, 2014
- Comparison of bacterial community in aqueous and oil phases of water-flooded petroleum reservoirs using pyrosequencing and clone library approachesApplied Microbiology and Biotechnology, 2014
- Halomonas nanhaiensis sp. nov., a halophilic bacterium isolated from a sediment sample from the South China SeaAntonie van Leeuwenhoek, 2013
- Isolation and characterization of Klebsiella oxytoca strain degrading crude oil from a Tunisian off‐shore oil fieldJournal of Basic Microbiology, 2011
- Characterisation of culture-independent and -dependent microbial communities in a high-temperature offshore chalk petroleum reservoirAntonie van Leeuwenhoek, 2009
- Desulfonauticus autotrophicus sp. nov., a novel thermophilic sulfate-reducing bacterium isolated from oil-production water and emended description of the genus DesulfonauticusExtremophiles, 2008