Genetic regulation of fatty acid content in adipose tissue
Authors:
- Xinyu YanXYXinyu Yan
- Amy L. RobertsARAmy L. Roberts
- Julia S. El-Sayed MoustafaJMJulia S. El-Sayed Moustafa
- Sergio VillicañaSVSergio Villicaña
- Max TomlinsonMTMax Tomlinson
- Cristina MenniCMCristina Menni
- Thomas A. B. SandersTSThomas A. B. Sanders
- Maxim B. FreidinMFMaxim B. Freidin
- Jordana T. BellJBJordana T. Bell
- Kerrin S. SmallKSKerrin S. Small
Preprint
Abstract
Fatty acids are important as structural components, energy sources, and signaling mediators. While studies have extensively explored genetic regulation of fatty acids in serum and other bodily fluids, their regulation within adipose tissue, a crucial regulator of cardiovascular and metabolic health remains unclear. Here, we investigated the genetic regulation of 18 fatty acids in subcutaneous adipose tissue from 569 female twins from TwinsUK. Using twin models, the heritability of fatty acids ranged from 5% to 59%, indicating a substantial genetic regulation of fatty acid levels within adipose tissue, which was also tissue-specific in many cases. Genome-wide association studies identified ten significant loci, in SCD, ADAMTSL1, ZBTB41, SNTB1, EXOC6B, ACSL3, LINC02055, MKRN2/TSEN2, FADS1 and HAPLN across 13 fatty acids or fatty acid product-to-precursor ratios. Using adipose gene expression and methylation, which were concurrently measured in these samples, we detected five fatty acid-associated signals that colocalized with eQTL and meQTL signals, highlighting fatty acids that are regulated by molecular processes within adipose tissue. We identified strong associations of adipose fatty acids-associated loci with type 2 diabetes, body fat percentage, and cardiovascular disease. We explored links between polygenic scores of common metabolic traits and adipose fatty acid levels, and identified associations between polygenic scores of BMI, body-fat distribution and triglycerides and several fatty acids, indicating these risk scores impact local adipose tissue content. Overall, our results identified local genetic regulation of fatty acids within adipose tissue and highlighted their links with renal and cardio-metabolic health.Keywords
All Related Versions
- Published version: The American Journal of Human Genetics, 113 (2), 291.
Funding Information
- Accelerating Medicine Partnership Common Metabolic Disease
- JPI HDHL-funded DIMENSION project (BB/S020845/1)
- China Scholarship Council
- National Institute for Health and Care Research
- Biomedical Research Centre
- Italian Ministry of Health - Bando Ricerca Corrente 2023
- Wellcome Trust
- European Union Horizon 2020
- NIHR Clinical Research Network
This publication has 90 references indexed in Scilit:
- A somatic mutation-derived LncRNA signatures of genomic instability predicts the prognosis and tumor microenvironment immune characters in hepatocellular carcinomaHepatology International, 2022
- Cancer-associated fibroblasts-derived HAPLN1 promotes tumour invasion through extracellular matrix remodeling in gastric cancerGastric Cancer, 2021
- Association of FADS1/2 Locus Variants and Polyunsaturated Fatty Acids With Aortic StenosisJAMA Cardiology, 2020
- Association of genetic variants related to plasma fatty acids with type 2 diabetes mellitus and glycaemic traits: a Mendelian randomisation studyDiabetologia, 2019
- A Robust Example of Collider Bias in a Genetic Association StudyThe American Journal of Human Genetics, 2016
- Plasma fatty acids as predictors of glycaemia and type 2 diabetesDiabetologia, 2015
- Polyunsaturated fatty acid regulation of adipocyte FADS1 and FADS2 expression and functionObesity, 2015
- Global Analysis of DNA Methylation Variation in Adipose Tissue from Twins Reveals Links to Disease-Associated Variants in Distal Regulatory ElementsThe American Journal of Human Genetics, 2013
- Fatty acid desaturases in human adipose tissue: relationships between gene expression, desaturation indexes and insulin resistanceDiabetologia, 2007
- Fatty acid composition of adipose tissue in humans. Implications for the dietary fat-serum cholesterol-CHD issueProgress in Lipid Research, 1995