Innovation, conservation, and repurposing of gene function in root cell type development

This publication has 122 references indexed in Scilit:

• Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples
  Theory in Biosciences, 2012
• The tomato genome sequence provides insights into fleshy fruit evolution
  Nature, 2012
• Fast gapped-read alignment with Bowtie 2
  Nature Methods, 2012
• Cell Identity Regulators Link Development and Stress Responses in the Arabidopsis Root
  Developmental Cell, 2011
• RSS1 regulates the cell cycle and maintains meristematic activity under stress conditions in rice
  Nature Communications, 2011
• A Simple Method for Gene Expression and Chromatin Profiling of Individual Cell Types within a Tissue
  Developmental Cell, 2010
• Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
  Molecular Cell, 2010
• Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate
  Nature, 2010
• Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
  Nature Protocols, 2009
• OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes
  Genome Research, 2003