Identification and expression of forkhead box genes in the Chinese giant salamander Andrias davidianus
Authors:
- 26 September 2017
- journal article
- research article
- Published by CSIRO Publishing in Reproduction, Fertility and Development
- Vol. 30 (4) , 634-642
Abstract
In the present study, 21 forkhead box (Fox) genes were identified in Andrias davidianus, including 13 full-length genes and eight partial sequences. Phylogenetic analysis showed that most were conserved in other investigated amphibians, whereas the Foxk1 gene was found exclusively in A. davidianus. Molecular evolution analysis indicated that most Fox genes underwent purifying selection, whereas two sites of the adFoxp4 gene showed positive selection and were located on the adFoxp4 protein surface. Expression profiles of all Fox genes identified were analysed in the hypothalamic–pituitary–gonad axis by reverse transcription–quantitative polymerase chain reaction. Eighteen genes exhibited sexually dimorphic expression (15 ovary-biased and three testis-biased genes), whereas two genes showed no difference between ovary and testis. Further investigation of 12 selected sexually dimorphic Fox genes showed changes in the expression profile of 11 genes in the ovary of larvae reared at high temperatures (28°C). The results of the present study provide information on Fox genes in an amphibian and suggest that they play key roles in sexual development and reproduction in A. davidianus.Keywords
This publication has 47 references indexed in Scilit:
- Transcriptome Analysis of the Silkworm (Bombyx mori) by High-Throughput RNA SequencingPLOS ONE, 2012
- Probing the Xenopus laevis inner ear transcriptome for biological functionBMC Genomics, 2012
- Foxo1 is required in mouse spermatogonial stem cells for their maintenance and the initiation of spermatogenesisJournal of Clinical Investigation, 2011
- I-TASSER: a unified platform for automated protein structure and function predictionNature Protocols, 2010
- The evolution of Fox genes and their role in development and diseaseNature Reviews Genetics, 2009
- Requirement for Shh and Fox family genes at different stages in sweat gland developmentHuman Molecular Genetics, 2009
- FoxK mediates TGF-β signalling during midgut differentiation in fliesJournal of Cell Biology, 2008
- PAML 4: Phylogenetic Analysis by Maximum LikelihoodMolecular Biology and Evolution, 2007
- [9] TM4 Microarray Software Suite2006
- MUSCLE: multiple sequence alignment with high accuracy and high throughputNucleic Acids Research, 2004