Intermittent search strategies
Authors:
- O. BénichouOBO. Bénichou
- C. LoverdoCLC. Loverdo
- M. MoreauMMM. Moreau
- R. VoituriezRVR. Voituriez
Top Cited Papers
- 28 March 2011
- journal article
- research article
- Published by American Physical Society (APS) in Reviews of Modern Physics
- Vol. 83 (1) , 81-129
Abstract
This review examines intermittent target search strategies, which combine phases of slow motion, allowing the searcher to detect the target, and phases of fast motion during which targets cannot be detected. It is first shown that intermittent search strategies are actually widely observed at various scales. At the macroscopic scale, this is, for example, the case of animals looking for food; at the microscopic scale, intermittent transport patterns are involved in a reaction pathway of DNA-binding proteins as well as in intracellular transport. Second, generic stochastic models are introduced, which show that intermittent strategies are efficient strategies that enable the minimization of search time. This suggests that the intrinsic efficiency of intermittent search strategies could justify their frequent observation in nature. Last, beyond these modeling aspects, it is proposed that intermittent strategies could also be used in a broader context to design and accelerate search processes.Keywords
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This publication has 164 references indexed in Scilit:
- Dynamic Strategies for Target-Site Search by DNA-Binding ProteinsBiophysical Journal, 2010
- Quantitative Analysis of Single Particle Trajectories: Mean Maximal Excursion MethodBiophysical Journal, 2010
- Molecular crowding affects diffusion and binding of nuclear proteins in heterochromatin and reveals the fractal organization of chromatinThe EMBO Journal, 2009
- Fractal reorientation clocks: Linking animal behavior to statistical patterns of searchProceedings of the National Academy of Sciences, 2008
- How DNA coiling enhances target localization by proteinsProceedings of the National Academy of Sciences, 2008
- Hopping of a processivity factor on DNA revealed by single-molecule assays of diffusionProceedings of the National Academy of Sciences, 2008
- Visualizing one-dimensional diffusion of proteins along DNANature Structural & Molecular Biology, 2008
- Probing microscopic origins of confined subdiffusion by first-passage observablesProceedings of the National Academy of Sciences, 2008
- How gene order is influenced by the biophysics of transcription regulationProceedings of the National Academy of Sciences, 2007
- Regulation of Body Size and Behavioral State of C. elegans by Sensory Perception and the EGL-4 cGMP-Dependent Protein KinaseNeuron, 2002