Identification of New Potent Human Uncoupling Protein 1 (UCP1) Agonists Using Virtual Screening and in vitro Approaches
- 2 July 2019
- journal article
- research article
- Published by Wiley in Molecular Informatics
- Vol. 38 (10) , e1900030
Abstract
Recent studies suggested that activation of Uncoupling Protein 1 (UCP1) has become an appealing therapeutic strategy against obesity and diabetes. In our research, the 3D structure of UCP1 was constructed through homology modelling, refined through molecular dynamics simulation, and evaluated by Ramachandran plot, the molecular docking of UCP1 activators brought about the proposal of an interaction mode inside the UCP1 active site. Remarkably, Reside Lys126 formed hydrogen bond; residues Pro121, Val125, Tyr146, Tyr149 and Arg150 formed hydrophobic interaction, which are key amino acids within UCP1 site. Then a pharmacophore model was generated consisting of three hydrophobic groups, a negative center and an additional hydrophobic group. Pharmacophore‐based virutal screening of Specs database yield 5 hits. In vitro assay indicated ZINC 04660290 significantly increased the protein expression of UCP1 and decreased the fat droplet in a dose‐dependent manner. Besides, pharmacokinetic properties were predicted for those five compounds through ADME/T prediction. All of these will guide us to design new UCP1 activators for the treatment of obesity and diabetes.Keywords
Funding Information
- Science and Technology Major Project, People's Republic of China (AWS14L008)
This publication has 44 references indexed in Scilit:
- Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searchingNature, 2011
- 3,4,5-Trisubstituted-1,2,4-4H-triazoles as WT and Y188L mutant HIV-1 non-nucleoside reverse transcriptase inhibitors: docking-based CoMFA and CoMSIA analysesJournal of Molecular Modeling, 2010
- High Incidence of Metabolically Active Brown Adipose Tissue in Healthy Adult HumansDiabetes, 2009
- AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibilityJournal of Computational Chemistry, 2009
- Cold-Activated Brown Adipose Tissue in Healthy MenNew England Journal of Medicine, 2009
- Identification and Importance of Brown Adipose Tissue in Adult HumansNew England Journal of Medicine, 2009
- Within brown-fat cells, UCP1-mediated fatty acid-induced uncoupling is independent of fatty acid metabolismBiochimica et Biophysica Acta (BBA) - Bioenergetics, 2008
- An ancient look at UCP1Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2008
- Chimeric Proteins between UCP1 and UCP3: The Middle Third of UCP1 Is Necessary and Sufficient for Activation by Fatty AcidsBiochemical and Biophysical Research Communications, 2000
- Assessment of protein models with three-dimensional profilesNature, 1992