Genome‐wide linkage analysis of quantitative biomarker traits of osteoarthritis in a large, multigenerational extended family
Open Access
- 25 February 2010
- journal article
- research article
- Published by Wiley in Arthritis & Rheumatism
- Vol. 62 (3) , 781-790
Abstract
Objective The genetic contributions to the multifactorial disorder osteoarthritis (OA) have been increasingly recognized. The goal of the current study was to use OA‐related biomarkers of severity and disease burden as quantitative traits to identify genetic susceptibility loci for OA. Methods In a large multigenerational extended family (n = 350), we measured 5 OA‐related biomarkers: hyaluronan (HA), cartilage oligomeric matrix protein (COMP), N‐propeptide of type IIA collagen (PIIANP), C‐propeptide of type II procollagen (CPII), and type II collagen neoepitope (C2C). Single‐nucleotide polymorphism markers (n = 6,090) covering the whole genome were genotyped using the Illumina HumanLinkage‐12 BeadChip. Variance components analysis, as implemented in the Sequential Oligogenic Linkage Analysis Routines, was used to estimate heritabilities of the quantitative traits and to calculate 2‐point and multipoint logarithm of odds (LOD) scores using a polygenic model. Results After adjusting for age and sex, we found that 4 of the 5 biomarkers exhibited significant heritability (PIIANP 0.57, HA 0.49, COMP 0.43, C2C 0.30; P ≤ 0.01 for all). Fourteen of the 19 loci that had multipoint LOD scores of >1.5 were near to or overlapped with previously reported OA susceptibility loci. Four of these loci were identified by more than 1 biomarker. The maximum multipoint LOD scores for the heritable quantitative biomarker traits were 4.3 for PIIANP (chromosome 8p23.2), 3.2 for COMP (chromosome 8q11.1), 2.0 for HA (chromosome 6q16.3), and 2.0 for C2C (chromosome 5q31.2). Conclusion Herein, we report the first evidence of genetic susceptibility loci identified by OA‐related biomarkers in an extended family. Our results demonstrate that serum concentrations of PIIANP, HA, COMP, and C2C have substantial heritable components, and using these biomarkers, several genetic loci potentially contributing to the genetic diversity of OA were identified.Keywords
This publication has 58 references indexed in Scilit:
- Whole‐body bone scintigraphy provides a measure of the total‐body burden of osteoarthritis for the purpose of systemic biomarker validationArthritis & Rheumatism, 2009
- Biomarkers associated with clinical phenotypes of hand osteoarthritis in a large multigenerational family: the CARRIAGE family studyOsteoarthritis and Cartilage, 2008
- Genome-wide Association Scan Identifies a Prostaglandin-Endoperoxide Synthase 2 Variant Involved in Risk of Knee OsteoarthritisThe American Journal of Human Genetics, 2008
- Effect of Variation inCHI3L1on Serum YKL-40 Level, Risk of Asthma, and Lung FunctionNew England Journal of Medicine, 2008
- Genome-wide Association Study Identifies Genes for Biomarkers of Cardiovascular Disease: Serum Urate and DyslipidemiaThe American Journal of Human Genetics, 2008
- Replicating genotype–phenotype associationsNature, 2007
- Biological markers in osteoarthritisNature Clinical Practice Rheumatology, 2007
- The heritable determinants of cartilage oligomeric matrix proteinArthritis & Rheumatism, 2006
- The American College of Rheumatology criteria for the classification and reporting of osteoarthritis of the handArthritis & Rheumatism, 1990
- Development of criteria for the classification and reporting of osteoarthritis: Classification of osteoarthritis of the kneeArthritis & Rheumatism, 1986