Whole-Genome Sequencing of Lactobacillus johnsonii MT4, a Novel Strain Isolated from the Oral Cavity of C57BL/6 Mice
Open Access
- 17 May 2023
- journal article
- research article
- Published by American Society for Microbiology in Microbiology Resource Announcements
- Vol. 12 (5) , e0008923
Abstract
Lactobacillus johnsonii strain MT4, isolated from the oral cavity of C57BL/6 mice, elicits antimicrobial activity against disease-associated microorganisms. Short-read sequencing of the whole genome revealed a single genome of 1,883,026 bp, with a GC content of 34.4%, and no plasmids.Keywords
Funding Information
- HHS | National Institutes of Health (R01 DE013986/DE/NIDCR)
- HHS | National Institutes of Health (R01 GM127909/GM/NIGMS)
This publication has 12 references indexed in Scilit:
- Anticandidal Activities by Lactobacillus Species: An Update on Mechanisms of ActionFrontiers in Oral Health, 2021
- Improved metagenomic analysis with Kraken 2Genome Biology, 2019
- Lactobacillus johnsonii N6.2 Modulates the Host Immune Responses: A Double-Blind, Randomized Trial in Healthy AdultsFrontiers in Immunology, 2017
- Oral Microbiome Characterization in Murine ModelsBio-Protocol, 2017
- Roary: rapid large-scale prokaryote pan genome analysisBioinformatics, 2015
- Trimmomatic: a flexible trimmer for Illumina sequence dataBioinformatics, 2014
- Prokka: rapid prokaryotic genome annotationBioinformatics, 2014
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell SequencingJournal of Computational Biology, 2012
- Search and clustering orders of magnitude faster than BLASTBioinformatics, 2010
- Improvement of the human intestinal flora by ingestion of the probiotic strainLactobacillus johnsoniiLa1British Journal of Nutrition, 2006