Population genomic analysis unravels the evolutionary roadmap of pericarp color in rice

This publication has 61 references indexed in Scilit:

• A map of rice genome variation reveals the origin of cultivated rice
  Nature, 2012
• Fast gapped-read alignment with Bowtie 2
  Nature Methods, 2012
• The variant call format and VCFtools
  Bioinformatics, 2011
• Molecular evidence for a single evolutionary origin of domesticated rice
  Proceedings of the National Academy of Sciences, 2011
• Genome-wide association studies of 14 agronomic traits in rice landraces
  Nature Genetics, 2010
• Genetic perspectives on crop domestication
  Trends in Plant Science, 2010
• The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
  Genome Research, 2010
• Variance component model to account for sample structure in genome-wide association studies
  Nature Genetics, 2010
• Fast model-based estimation of ancestry in unrelated individuals
  Genome Research, 2009
• FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
  Molecular Biology and Evolution, 2009