Weak population structure in the North American house wren Troglodytes aedon

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Abstract
Cryptic genetic differentiation is being increasingly documented in birds and other organisms using genome‐wide variation. A recent example of cryptic genetic differentiation in a widespread species with conserved morphology is the northern house wren Troglodytes aedon . We found that, despite extremely similar morphology and no documented vocal differences, the two subspecies of the northern house wren, T. a. aedon (eastern) and T. a. parkmanii (western), exhibited both nuclear and mitochondrial genomic differentiation. Individuals present along the Front Range of the Colorado Rocky Mountains possessed nuclear genetic variation intermediate between T. a. aedon and T. a. parkmanii ; additionally, both divergent mitochondrial lineages, corresponding to the western and eastern northern house wren populations, occur in Colorado. However, the dynamics of this putative contact zone (i.e. amount of hybridization or introgression) and the degree of differentiation between the two subspecies remain uncharacterized. To expand our understanding of northern house wren population genetic differentiation and explore the possibility of hybridization, we used a double digest restriction‐site associated (ddRAD) approach and sequenced 127 northern house wrens, including 109 individuals from across Colorado and Wyoming, as well as nine individuals each from eastern and western allopatric regions. Our results highlight that T. a. aedon occur significantly further west than previously thought, and provide evidence for weak population structure within the northern house wren, while generally setting the stage for future investigations of northern house wren population genomics and the genetic basis of cryptic speciation.

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