OpenWSI: a low-cost, high-throughput whole slide imaging system via single-frame autofocusing and open-source hardware
- 24 December 2019
- journal article
- research article
- Published by Optica Publishing Group in Optics Letters
- Vol. 45 (1) , 260-263
Abstract
Recent advancements in whole slide imaging (WSI) have moved pathology closer to digital practice. Existing systems require precise mechanical control, and the cost is prohibitive for most individual pathologists. Here we report a low-cost and high-throughput WSI system termed OpenWSI. The reported system is built using off-the-shelf components, including a programmable LED array, a photographic lens, and a low-cost computer numerical control (CNC) router. Different from conventional WSI platforms, our system performs real-time single-frame autofocusing using color-multiplexed illumination. For axial positioning control, we perform coarse adjustment using the CNC router and precise adjustment using the ultrasonic motor ring in the photographic lens. By using a 20X objective lens, we show that the OpenWSI system has a resolution of ∼ 0.7 µ m . It can acquire whole slide images of a 225 m m 2 region in ∼ 2 m i n s with throughput comparable to existing high-end platforms. The reported system offers a turnkey solution to transform the high-end WSI platforms into one that can be made broadly available and utilizable without loss of capacity.Keywords
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Funding Information
- UConn SPARK
This publication has 13 references indexed in Scilit:
- Rapid and robust whole slide imaging based on LED-array illumination and color-multiplexed single-shot autofocusingQuantitative Imaging in Medicine and Surgery, 2019
- Rapid focus map surveying for whole slide imaging with continuous sample motionOptics Letters, 2017
- Current State of the Regulatory Trajectory for Whole Slide Imaging Devices in the USAJournal of Pathology Informatics, 2017
- Wide-field, high-resolution Fourier ptychographic microscopyNature Photonics, 2013
- Digital Imaging in Pathology: Whole-Slide Imaging and BeyondAnnual Review of Pathology: Mechanisms of Disease, 2013
- Autofocus methods of whole slide imaging systems and the introduction of a second-generation independent dual sensor scanning methodJournal of Pathology Informatics, 2011
- The accuracy of dynamic predictive autofocusing for whole slide imagingJournal of Pathology Informatics, 2011
- Simple and robust image-based autofocusing for digital microscopyOptics Express, 2008
- Evaluation of autofocus functions in molecular cytogenetic analysisJournal of Microscopy, 1997
- A comparison of different focus functions for use in autofocus algorithmsCytometry, 1985