Development of a tomato functional–structural plant model for digital twin applications
Open Access
- 14 July 2025
- journal article
- Published by Oxford University Press (OUP) in in silico Plants
- Vol. 7 (2)
Abstract
Digital-twin technology is a promising decision-support tool in controlled-environment agriculture, that can be applied to optimize agronomic production, improve management decisions, and formulate data-driven breeding strategies. We developed a concept for a digital twin of a tomato crop in a high-tech greenhouse with the aim to help increase resource-use efficiency of greenhouse tomatoes. At the core of the digital twin is a functional–structural plant (FSP) model that can simulate 3D architectural development and growth of young tomato plants and can be used to predict plant responses to environmental factors and management interventions. In this study, we present the newly developed tomato FSP model and procedures to use data from climate sensors and image data of single plants from high-throughput phenotyping, to feed the FSP model to ensure synchronization with the real-world crop development. A greenhouse climate model is used to calculate the indoor climate above the crop based on outdoor weather data, greenhouse properties, and climate control settings. Synchronization of plant architecture between the real and the virtual crop is demonstrated for plant height adjustments, by performing model calibration based on Bayesian optimization. The tomato FSP model is designed to study the role of individual organ traits and assess the effects of architectural manipulations, such as leaf pruning, and lighting strategies. The presented framework addresses a vital component of a digital twin representing the flow of information from the real crop to the virtual crop.Keywords
Funding Information
- Wageningen University and Research
This publication has 70 references indexed in Scilit:
- Machine vision based plant height estimation for protected crop facilitiesComputers and Electronics in Agriculture, 2024
- Virtual reality-based digital twins for greenhouses: A focus on human interactionComputers and Electronics in Agriculture, 2023
- Digital Twins in Agriculture: A State-of-the-art reviewSmart Agricultural Technology, 2022
- Digital Twins in greenhouse horticulture: A reviewComputers and Electronics in Agriculture, 2022
- Data collection design for calibration of crop models using practical identifiability analysisComputers and Electronics in Agriculture, 2021
- Introducing digital twins to agricultureComputers and Electronics in Agriculture, 2021
- Digital twins in smart farmingAgricultural Systems, 2021
- Bayesian calibration of AquaCrop model for winter wheat by assimilating UAV multi-spectral imagesComputers and Electronics in Agriculture, 2019
- Quantifying the effect of crop spatial arrangement on weed suppression using functional-structural plant modellingJournal of Plant Research, 2016
- Relational Growth Grammars – A Parallel Graph Transformation Approach with Applications in Biology and Architecture2008