A fast and sensitive activity assay for lytic polysaccharide monooxygenase
Open Access
- 23 March 2018
- journal article
- research article
- Published by Springer Nature in Biotechnology for Biofuels
- Vol. 11 (1) , 79
Abstract
Lytic polysaccharide monooxygenases (LPMO) release a spectrum of cleavage products from their polymeric substrates cellulose, hemicellulose, or chitin. The correct identification and quantitation of these released products is the basis of MS/HPLC-based detection methods for LPMO activity. The duration, effort, and intricate analysis allow only specialized laboratories to measure LPMO activity in day-to-day work. A spectrophotometric assay will simplify the screening for LPMO in culture supernatants, help monitor recombinant LPMO expression and purification, and support enzyme characterization. Based on a newly discovered peroxidase activity of LPMO, we propose a fast, robust, and sensitive spectrophotometric activity assay using 2,6-dimethoxyphenol (2,6-DMP) and H2O2. The fast enzymatic assay (300 s) consists of 1 mM 2,6-DMP as chromogenic substrate, 100 µM H2O2 as cosubstrate, and an adequate activity of LPMO in a suitable buffer. The high molar absorption coefficient of the formed product coerulignone (ε469 = 53,200 M−1 cm−1) makes the assay sensitive and allows reliable activity measurements of LPMO in concentrations of approx. 0.5–50 mg L−1. The activity assay based on 2,6-DMP detects a novel peroxidase activity of LPMO. This activity can be accurately measured and used for enzyme screening, production, and purification, and can also be applied to study binding constants or thermal stability. However, the assay has to be used with care in crude extracts, because other enzymes such as laccase or peroxidase will interfere with the assay. We also want to stress that the peroxidase activity is a homogeneous reaction with soluble substrates and should not be correlated to heterogeneous LPMO activity on polymeric substrates.Keywords
Funding Information
- Austrian Science Fund (I2385-N28, W1224)
- OeAD-GmbH (HR 12/2016)
This publication has 37 references indexed in Scilit:
- Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymesBiotechnology for Biofuels, 2013
- Efficient separation of oxidized cello-oligosaccharides generated by cellulose degrading lytic polysaccharide monooxygenasesJournal of Chromatography A, 2013
- Two Oxidation Sites for Low Redox Potential SubstratesJournal of Biological Chemistry, 2012
- Production of four Neurospora crassa lytic polysaccharide monooxygenases in Pichia pastoris monitored by a fluorimetric assayBiotechnology for Biofuels, 2012
- A chloride tolerant laccase from the plant pathogen ascomycete Botrytis aclada expressed at high levels in Pichia pastorisJournal of Biotechnology, 2012
- Cleavage of cellulose by a CBM33 proteinProtein Science, 2011
- High-yield production of aromatic peroxygenase by the agaric fungus Marasmius rotulaAMB Express, 2011
- Fluoride-Dependent Conversion of Organic Compounds Mediated by Manganese Peroxidases in the Absence of Mn2+ IonsBiochemistry, 2010
- Expression system of CotA‐laccase for directed evolution and high‐throughput screenings for the oxidation of high‐redox potential dyesBiotechnology Journal, 2009
- Oxidative coupling of 2,6-dimethoxyphenol by fungi and bacteriaMycological Research, 1991