Effective fragment potential method in Q‐CHEM: A guide for users and developers
- 15 January 2013
- journal article
- research article
- Published by Wiley in Journal of Computational Chemistry
- Vol. 34 (12) , 1060-1070
Abstract
A detailed description of the implementation of the effective fragment potential (EFP) method in the Q‐CHEM electronic structure package is presented. The Q‐CHEM implementation interfaces EFP with standard quantum mechanical (QM) methods such as Hartree–Fock, density functional theory, perturbation theory, and coupled‐cluster methods, as well as with methods for electronically excited and open‐shell species, for example, configuration interaction, time‐dependent density functional theory, and equation‐of‐motion coupled‐cluster models. In addition to the QM/EFP functionality, a “fragment‐only” feature is also available (when the system is described by effective fragments only). To aid further developments of the EFP methodology, a detailed description of the C++ classes and EFP module's workflow is presented. The EFP input structure and EFP job options are described. To assist setting up and performing EFP calculations, a collection of Perl service scripts is provided. The precomputed EFP parameters for standard fragments such as common solvents are stored in Q‐CHEM's auxiliary library; they can be easily invoked, similar to specifying standard basis sets. The instructions for generating user‐defined EFP parameters are given. Fragments positions can be specified by their center of mass coordinates and Euler angles. The interface with the IQMOL and WEBMO software is also described.Keywords
This publication has 58 references indexed in Scilit:
- Modeling Solvent Effects on Electronic Excited StatesThe Journal of Physical Chemistry Letters, 2011
- Effect of Solvation on the Vertical Ionization Energy of Thymine: From Microhydration to BulkThe Journal of Physical Chemistry A, 2011
- Solvent Effects on the Electronic Transitions ofp-Nitroaniline: A QM/EFP StudyThe Journal of Physical Chemistry A, 2010
- Solvent-Induced Frequency Shifts: Configuration Interaction Singles Combined with the Effective Fragment Potential MethodThe Journal of Physical Chemistry A, 2010
- Solvation of the Excited States of Chromophores in Polarizable Environment: Orbital Relaxation versus Polarization†The Journal of Physical Chemistry A, 2010
- Solvent effects on optical properties of molecules: A combined time-dependent density functional theory/effective fragment potential approachThe Journal of Chemical Physics, 2008
- Chapter 10 The Effective Fragment Potential: A General Method for Predicting Intermolecular Interactions2007
- The Effective Fragment Potential Method: A QM-Based MM Approach to Modeling Environmental Effects in ChemistryThe Journal of Physical Chemistry A, 2000
- Analytical second derivatives of the free energy in solution by polarizable continuum modelsThe Journal of Chemical Physics, 1998
- An effective fragment method for modeling solvent effects in quantum mechanical calculationsThe Journal of Chemical Physics, 1996