Sustainable computational science: the ReScience initiative
Authors:
- Nicolas P. RougierNRNicolas P. Rougier
- Thomas ArildsenTAThomas Arildsen
- Lorena BarbaLBLorena Barba
- Fabien C. Y. BenureauFBFabien C. Y. Benureau
- C. Titus BrownCBC. Titus Brown
- Pierre de BuylPBPierre de Buyl
- Ozan CaglayanOCOzan Caglayan
- Andrew P. DavisonADAndrew P. Davison
Preprint
Abstract
Computer science offers a large set of tools for prototyping, writing, running, testing, validating, sharing and reproducing results, however computational science lags behind. In the best case, authors may provide their source code as a compressed archive and they may feel confident their research is reproducible. But this is not exactly true. James Buckheit and David Donoho proposed more than two decades ago that an article about computational results is advertising, not scholarship. The actual scholarship is the full software environment, code, and data that produced the result. This implies new workflows, in particular in peer-reviews. Existing journals have been slow to adapt: source codes are rarely requested, hardly ever actually executed to check that they produce the results advertised in the article. ReScience is a peer-reviewed journal that targets computational research and encourages the explicit replication of already published research, promoting new and open-source implementations in order to ensure that the original research can be replicated from its description. To achieve this goal, the whole publishing chain is radically different from other traditional scientific journals. ReScience resides on GitHub where each new implementation of a computational study is made available together with comments, explanations, and software tests.Keywords
All Related Versions
This publication has 22 references indexed in Scilit:
- Reproducible Research in Computational Chemistry of MaterialsChemistry of Materials, 2017
- A manifesto for reproducible scienceNature Human Behaviour, 2017
- Democratic databases: science on GitHubNature, 2016
- 1,500 scientists lift the lid on reproducibilityNature, 2016
- Reproducible and User-Controlled Software Environments in HPC with Guix2015
- Writing Software SpecificationsComputing in Science & Engineering, 2015
- Bringing the Gold Standard into the Classroom: Replication in University TeachingInternational Studies Perspectives, 2015
- Learning from the Past: Approaches for Reproducibility in Computational Neuroscience2013
- Automated Capture of Experiment Context for Easier Reproducibility in Computational ResearchComputing in Science & Engineering, 2012
- Reproducible Research in Computational Harmonic AnalysisComputing in Science & Engineering, 2008