MYB regulator of “colorless” flavonols underlies the evolution of red flowers in Iochroma (Solanaceae)
Open Access
- 30 September 2025
- journal article
- Published by Oxford University Press (OUP) in G3: Genes, Genomes, Genetics
- Vol. 15 (12)
Abstract
Anthocyanins, the pigments that give rise to blue, purple, red, and pink colors in many flowers and fruits, are produced by the deeply conserved flavonoid biosynthesis pathway. The regulation of this pathway is thus fundamental for species differences in color across flowering plants, and a growing body of evidence implicates MYB transcription factors as key players activating or suppressing the production of different pigments. Nevertheless, the potential role of MYBs genes in determining the type of pigment produced (as opposed to the overall amount) is unknown. Here, we demonstrate that a lineage of R2R3 MYBs that is closely related to well-known flavonol regulators (MYB12 members in subgroup 7) is the primary determinant of the shift from blue to red flowers in the genus Iochroma. Similar to its ortholog in Capsicum, this Iochroma MYB12-like gene controls the expression of flavonoid-3′-hydroxylase, the pathway branch point between red and blue pigments, and when down-regulated, results in redirection of flux toward red pigments. These results underscore the importance of transcription factor evolution in generating phenotypic novelty as well as the competitive nature of interactions among flavonoid pathway branches. In addition, our study demonstrates the effectiveness of RNAseq of segregating populations, in combination with other lines of evidence, for identifying novel functional variation.Keywords
Funding Information
- National Science Foundation (DEB 1553114)
- National Science Foundation (ACI-1532235, ACI-1532236, ACI-2201538)
This publication has 105 references indexed in Scilit:
- Single gene mutation in a plant MYB transcription factor causes a major shift in pollinator preferenceCurrent Biology, 2022
- Genome sequence for the blue‐flowered Andean shrub Iochroma cyaneum reveals extensive discordance across the berry clade of SolanaceaeThe Plant Genome, 2022
- Structure and contingency determine mutational hotspots for flower color evolutionEvolution Letters, 2020
- Developmental control of convergent floral pigmentation across evolutionary timescalesDevelopmental Dynamics, 2019
- Repeated evolution of a morphological novelty: a phylogenetic analysis of the inflated fruiting calyx in the Physalideae tribe (Solanaceae)American Journal of Botany, 2019
- Diversification of R2R3-MYB Transcription Factors in the Tomato Family SolanaceaeJournal of Molecular Evolution, 2016
- Estimating Genome‐Wide Significance for Whole‐Genome Sequencing StudiesGenetic Epidemiology, 2014
- Natural Variation in Leaf Morphology Results from Mutation of a Novel KNOX GeneCurrent Biology, 2008
- Identification of the molecular basis for the functional difference between flavonoid 3′‐hydroxylase and flavonoid 3′,5′‐hydroxylaseFEBS Letters, 2007
- The Evolution of Flavonoids and Their Genes2006