Multicomponent Assembly of Proposed DNA Precursors in Water
Open Access
- 9 August 2012
- journal article
- research article
- Published by American Chemical Society (ACS) in Journal of the American Chemical Society
- Vol. 134 (33) , 13889-13895
Abstract
We propose a novel pathway for the prebiotic synthesis of 2′-deoxynucleotides. Consideration of the constitutional chemical relationships between glycolaldehyde and β-mercapto-acetaldehyde, and the corresponding proteinogenic amino acids, serine and cysteine, led us to explore the consequences of the corresponding sulfur substitution for our previously proposed pathways leading to the canonical ribonucleotides. We demonstrate that just as 2-aminooxazole–an important prebiotic ribonucleotide precursor–is readily formed from glycolaldehyde and cyanamide, so is 2-aminothiazole formed from β-mercapto-acetaldehyde and cyanamide in water at neutral pH. Indeed, both the oxazole and the thiazole can be formed together in a one-pot reaction, and can be co-purified by crystallization or sublimation. We then show that 2-aminothiazole can take part in a 3-component carbon–carbon bond-forming reaction in water that leads to the diastereoselective synthesis of masked 2′-thiosugars regiospecifically tethered to purine precursors, which would lead to 2′-deoxynucleotides upon desulfurization. The possibility of an abiotic route to the 2′-deoxynucleotides provides a new perspective on the evolutionary origins of DNA. We also show that 2-aminothiazole is able to sequester, through reversible aminal formation, the important nucleotide precursors glycolaldehyde and glyceraldehyde in a stable, crystalline form.Keywords
Funding Information
- Howard Hughes Medical Institute
- National Science Foundation
- http://pubs.acs.org/doi/pdf/10.1021/ja306176n
This publication has 46 references indexed in Scilit:
- Graphical Abstract: Angew. Chem. Int. Ed. 50/2011Angewandte Chemie International Edition, 2011
- Evolution of functional nucleic acids in the presence of nonheritable backbone heterogeneityProceedings of the National Academy of Sciences, 2011
- Primordial synthesis of amines and amino acids in a 1958 Miller H 2 S-rich spark discharge experimentProceedings of the National Academy of Sciences, 2011
- Chemoselective Multicomponent One-Pot Assembly of Purine Precursors in WaterJournal of the American Chemical Society, 2010
- The Origins of the RNA WorldCold Spring Harbor Perspectives in Biology, 2010
- L-amino acids catalyze the formation of an excess of D-glyceraldehyde, and thus of other D sugars, under credible prebiotic conditionsProceedings of the National Academy of Sciences, 2010
- A Systematic Study of Glycolaldehyde in Sagittarius B2(N) at 2 and 3 mm: Criteria for Detecting Large Interstellar MoleculesThe Astrophysical Journal, 2006
- The unusual reactivity of hydroxymethyleneJournal of the American Chemical Society, 1985
- Synthesis of adenine from ammonium cyanideBiochemical and Biophysical Research Communications, 1960
- Potential Anticancer Agents.1 XIX. Synthesis of 2'-Deoxyadenosine2Journal of the American Chemical Society, 1959