Metallomics reveals a persisting impact of cadmium on the evolution of metal-selective snail metallothioneins
Open Access
- 20 March 2020
- journal article
- research article
- Published by Oxford University Press (OUP) in Metallomics
- Vol. 12 (5) , 702-720
Abstract
The tiny contribution of cadmium (Cd) to the composition of the earth’s crust contrasts with its high biological significance, owing mainly to the competition of Cd with the essential zinc (Zn) for suitable metal binding sites in proteins. In this context it was speculated that in several animal lineages, the protein family of metallothioneins (MTs) has evolved to specifically detoxify Cd. Although the multi-functionality and heterometallic composition of MTs in most animal species does not support such an assumption, there are some exceptions to this role, particularly in animal lineages at the roots of animal evolution. In order to substantiate this hypothesis and to further understand MT evolution, we have studied MTs of different snails that exhibit clear Cd-binding preferences in a lineage-specific manner. By applying a metallomics approach including 74 MT sequences from 47 gastropod species, and by combining phylogenomic methods with molecular, biochemical, and spectroscopic techniques, we show that Cd selectivity of snail MTs has resulted from convergent evolution of metal-binding domains that significantly differ in their primary structure. We also demonstrate how their Cd selectivity and specificity has been optimized by the persistent impact of Cd through 430 million years of MT evolution, modifying them upon lineage-specific adaptation of snails to different habitats. Overall, our results support the role of Cd for MT evolution in snails, and provide an interesting example of a vestigial abiotic factor directly driving gene evolution. Finally, we discuss the potential implications of our findings for studies devoted to the understanding of mechanisms leading to metal specificity in proteins, which is important when designing metal-selective peptides.Keywords
Funding Information
- Austrian Science Fund (DACH grant No I 1482-N28)
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (DACH grant No I 1482-N28)
- Universität Zürich (FK-18-083)
- Universität Innsbruck
- Ministerio de Ciencia e Innovación
- European Regional Development Fund (BIO2015-67358-C2-2-P, BIO2015-67358-C2-1-P)
- Austrian Science Fund (DACH grant No I 1482-N28)
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (DACH grant No I 1482-N28)
- Universität Zürich (FK-18-083)
- Universität Innsbruck
- Ministerio de Ciencia e Innovación
- European Regional Development Fund (BIO2015-67358-C2-2-P, BIO2015-67358-C2-1-P)
This publication has 88 references indexed in Scilit:
- SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genesBioinformatics, 2012
- MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model SpaceSystematic Biology, 2012
- Phylogenomics reveals deep molluscan relationshipsNature, 2011
- Full-length transcriptome assembly from RNA-Seq data without a reference genomeNature Biotechnology, 2011
- Northward shift in faunal diversity: A general pattern of evolution of phanerozoic marine biotaBiology Bulletin Reviews, 2011
- Shaping mechanisms of metal specificity in a family of metazoan metallothioneins: evolutionary differentiation of mollusc metallothioneinsBMC Biology, 2011
- On the origin of Acochlidia and other enigmatic euthyneuran gastropods, with implications for the systematics of HeterobranchiaBMC Ecology and Evolution, 2010
- Weathering of the New Albany Shale, Kentucky: II. Redistribution of minor and trace elementsApplied Geochemistry, 2009
- From sea to land and beyond – New insights into the evolution of euthyneuran Gastropoda (Mollusca)BMC Ecology and Evolution, 2008
- MUSCLE: multiple sequence alignment with high accuracy and high throughputNucleic Acids Research, 2004