Genome Sequence Resources for Five Isolates of Coniothyrium glycines, Causal Pathogen of Red Leaf Blotch of Soybeans
- 1 September 2023
- journal article
- research article
- Published by Scientific Societies in Phytofrontiers™
- Vol. 3 (2) , 452-455
Abstract
Red leaf blotch is a severe soybean disease caused by the select agent fungal pathogen Coniothyrium glycines. With little information about the pathogen, no molecular detection methods are available. Here, we report genome assemblies of five isolates, including reference isolates. These datasets provide a valuable resource for ongoing studies that include marker development, diagnostics, and population diversity. [ ] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .Keywords
Funding Information
- U.S. Department of Agriculture, Animal and Plant Health Inspection Service (APHIS), Plant Protection and Quarantine
- National Science Foundation (OAC-1531128)
This publication has 14 references indexed in Scilit:
- Twelve years of SAMtools and BCFtoolsGigaScience, 2021
- Draft Genome Sequences of Three Isolates of Coniothyrium glycines , Causal Agent of Red Leaf Blotch of SoybeanMicrobiology Resource Announcements, 2019
- Performance of neural network basecalling tools for Oxford Nanopore sequencingGenome Biology, 2019
- Assembly of long, error-prone reads using repeat graphsNature Biotechnology, 2019
- Versatile genome assembly evaluation with QUAST-LGBioinformatics, 2018
- NanoPack: visualizing and processing long-read sequencing dataBioinformatics, 2018
- Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithmGenome Research, 2017
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologsBioinformatics, 2015
- BLAST+: architecture and applicationsBMC Bioinformatics, 2009
- Fast and accurate short read alignment with Burrows–Wheeler transformBioinformatics, 2009